Gene Rfer_0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0714 
Symbol 
ID3963956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp755627 
End bp756529 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID637915545 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_521996 
Protein GI89899525 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTC TCCTTTTTGG CCGTGGCGGC CAGGTCGGCT GGGAGCTGCA GCGCAGTCTG 
TCGGTGCTGG GCGAGTTGGT GGCGCTGGGC TCTGACGCAT CCCACAACCC GGACGGCTTG
TGCGGCGACT TCAGCCATCT GCCCGGGCTG GCCGAGACGA TCCGCCGTGT CAAACCCGAC
GTGATCGTGA ACGCCGCTGC GCACACCGCC GTGGACAAAG CCGAGGCCGA GCCCGAACGG
GCCCGCGCCC TGAACGCGCT GGCCCCCGGC GTGCTGGCCG CCGAGGCGCA GAAGCTGGGC
GCCTGGCTGC TGCATTATTC GACCGACTAT GTGTTTGATG GCAGCGGCCA GCAAGCCTGG
CGCGAGGGCG ACGCCACCGG CCCCTTGAGC GTCTATGGCA AGACCAAGCT CGAAGGCGAA
CACCTTGTCA GCGCCTGTGC CAAGCATCTG ATTTTCCGCA CCAGCTGGGT CTACGCCGCC
CGCGGTGGCA ACTTTGCCAA GACCATGCTG CGCCTGGCCG GCGAGCGCGA CACGCTGACC
GTGATCGACG ACCAGATCGG CGCGCCGACG TCGGCCGAAC TGCTGGCCGA CGTAACGGCG
CATGCACTGG CCAAGGCCAT GCGGGCGCCC GAGCTGGCCG GCCTGTACCA CTGCGTAGCC
GGCGGCGAGA CCAGTTGGTA CGGCTACGCC CGCTACGTGC TGGGTCAGGC GCAAGCGCTG
GGCTGCCAAC TCAAGGCCGG GCCGGATCAA GTGTTGCCCA CCGCGACTGC CAGCTACCCG
ACCCCGGCGC GCCGACCATT GAATTCGCGC CTGGACACGC TCAAACTGCA GGCCGCTTTC
GGGCTGGTCC TGCCCCCCTG GCAGCAAGGC GTGGCGCGCA TGCTGGCGGA AACCCTGAAC
TGA
 
Protein sequence
MKILLFGRGG QVGWELQRSL SVLGELVALG SDASHNPDGL CGDFSHLPGL AETIRRVKPD 
VIVNAAAHTA VDKAEAEPER ARALNALAPG VLAAEAQKLG AWLLHYSTDY VFDGSGQQAW
REGDATGPLS VYGKTKLEGE HLVSACAKHL IFRTSWVYAA RGGNFAKTML RLAGERDTLT
VIDDQIGAPT SAELLADVTA HALAKAMRAP ELAGLYHCVA GGETSWYGYA RYVLGQAQAL
GCQLKAGPDQ VLPTATASYP TPARRPLNSR LDTLKLQAAF GLVLPPWQQG VARMLAETLN