| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0704 |
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| Symbol | |
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| ID | 3963946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 743644 |
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| End bp | 745005 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637915535 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_521986 |
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| Protein GI | 89899515 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02915] putative PEP-CTERM system response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCGG AGACCGTACG CTCGTTGTTG ATCGTCGAGG ACGATCTGGC ACTGCAAAAA
CAAATCAAGT GGTCGCTCGA CCGCTTTGAA TCAGTGACTG CCCATGATCG CAGTAGCGCC
TTGCTGCAAT TGCGCAAATG CTTGCCGGCG GTGGTCACGA TGGACCTGGG GCTGCCGCCC
GATGCCGACT CGGTGTCCGA AGGGCTCAAG TTGCTGGAGC AGGTGATGGC GTTTGATCCC
GATATCAAGG TGATTGTCCT GACCGGACAG AACGATCAGG CCAATGCCCT GCGTGCGGTG
GCCATGGGCG CCTATGATTT TTTCGCCAAA CCGTTCGAGC CCGAGCTGCT CAACTTGACG
GTGGAGCGCG CTTTCAGGAT GTTTGAGCTG CAAAGGGAAA ACCGGCGGCT GCAGGCGCTG
CAGCAACCCG ATGCCATGGC AGGCCTGATC ACGCGTGACC CCGAAATGCT GCGCATCTGC
CGCACGATTG AGAAAGTGGC AAGCAGCAAT GCCACTGTCA TGTTGCTGGG TGAAAGTGGC
ACAGGCAAAG AGGTGCTGGC GCGCGGCTTG CACCAGGCGT CACCCCGGCG GGCGGAGAAA
TTTGTGGCCA TCAACTGTGC CGCCATTCCC GAGAACCTGC TGGAAAGCGA ATTGTTTGGC
TATGAAAAAG GTGCGTTCAC AGGTGCCGCC AAGATGACTT TGGGCAAGAT CGAAATGGCC
CACGGCGGTA CCTTGATGCT CGATGAGATA GGCGATTTGC CGCTGTCATT GCAGGCCAAG
CTGCTGCGAT TTTTGCAGGA AAGAGTGATC GAACGCGTCG GCGGCCGGCA GGAAATAGCG
GTTGATGTAC GCATTGTCTG TGCGACCCAT CAGGACCTGG CTGCGTTGAG CAAGGACGGA
CGGTTTCGCG AGGACTTGTA TTACCGCCTG GCTGAGATTG TGGTCAACAT TCCGCCCCTG
CGCGAGCGTG TGGGCGACGC CGCCTTGCTG GCACACGCTT TTGTGCGACG CTTTGCCCAA
GAGCAGAACC GCTCTGCCAT GACGCTGACC GAAGACGCGG TGCAGGCAGT TGAAAACCAT
CTGTGGCCGG GCAACATCCG TGAGCTTGAG AATTGCATCA GACGCGCCGC CATCATGGCC
GATGGCAGCC AAATCGGCTG CGACGACCTG GGTCTGAAAA GTCTCCAGAA CGATGAAACC
GACACCTCCC TGGATTTGCG TGTGATCCGT GACGACGCCG AGAAGCGGGC GATTGTGGCG
GCGCTGGGTC GCGTCAACGG CAACATGGTC AGGGCAGCTG ATTTGCTTGG GGTGAGTCGC
CCCACGTTGT ATGACTTGAT GCACCGACTT GCGTTGAAAT GA
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| Protein sequence | MTPETVRSLL IVEDDLALQK QIKWSLDRFE SVTAHDRSSA LLQLRKCLPA VVTMDLGLPP
DADSVSEGLK LLEQVMAFDP DIKVIVLTGQ NDQANALRAV AMGAYDFFAK PFEPELLNLT
VERAFRMFEL QRENRRLQAL QQPDAMAGLI TRDPEMLRIC RTIEKVASSN ATVMLLGESG
TGKEVLARGL HQASPRRAEK FVAINCAAIP ENLLESELFG YEKGAFTGAA KMTLGKIEMA
HGGTLMLDEI GDLPLSLQAK LLRFLQERVI ERVGGRQEIA VDVRIVCATH QDLAALSKDG
RFREDLYYRL AEIVVNIPPL RERVGDAALL AHAFVRRFAQ EQNRSAMTLT EDAVQAVENH
LWPGNIRELE NCIRRAAIMA DGSQIGCDDL GLKSLQNDET DTSLDLRVIR DDAEKRAIVA
ALGRVNGNMV RAADLLGVSR PTLYDLMHRL ALK
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