| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0680 |
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| Symbol | |
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| ID | 3963826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 710135 |
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| End bp | 712351 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637915511 |
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| Product | heparinase II/III-like |
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| Protein accession | YP_521962 |
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| Protein GI | 89899491 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGACA GAATTCTCTA TTACTGCTGG AGATTGGCAC TCCCCTTCGC TGTCGTTGCT
GCCGTGTGGA TACCTCATTT CTCGCACTAT CGGATTGATC GCAGTCCAGT TTCTTGGGAG
GCGGCACAAG CCTCCGCACA AGCACCAACT CCAGCTGTTT TGGACGAGAT ATCCGGCCAG
GCACTGGGTG CGCGGTTCGG CATACCAGAC GAAAAAATCC TCGGGATCGC CGAGCAGATA
TTGGTGGGCA CCCTCGCCGT ACCCAGCTTC CTGGAAGCGC CCATGGCCCT GCAAGGGTAT
CCAATAGACT ATCAACGTGG GTCATCATCC CTCCAACTTG TCATGGCCAG CCTGGAGGTT
GAACGCGTCT TGCTCAGCGC CTTCGAGCAA ACGCATGACC GGCGCTTTCT GGATTTGGCA
ACCCGTCGCG TCCTTGATTT CGCAGCGCAT GAAGCAGGGC AAAGACAGGG GGATGGGTTT
CTGTGGAACG ATCATGCGGT GGCCGGCAGA ATCTCCGTTT TGGCGAAGCT GTGGCGCCTC
GTGCGCGAGA GTCCTGAGCT CCCCATTGCG TCGTCCCGTC AGATTCTTTC ACTGGTTGAA
CGCAGCGGTC GTCTGCTGGC AAAGCCAACC CAATTCACCG TCAGAACCAA TCATGGCGTG
GCCCAAAATC TTGCACTTTT GCAGATTGCT GCTGCCTTCC CGGCACTGCC CGAATCCGGC
GCGTGGCGCA GGCTCGCGGT ACAAAGGCTG AATGTTCAAC TGCCCTTTTA TGTCTCGCGG
GAAGGTGTCA TTCTGGAACA TTCCGCCAAC TATCATTTGT TTGGAACTGA ATTGCTGACC
ATGGCGGTCC GACTCAGTGT TCTCAACGGC CTGAAGCCCG AGCCAGCGCT TGTTGATGCG
GCCCGTACTT CGCGTCAGGT GCTTGCCCGC CTGATGCGAC CGGATGGAAC CTTGCCAGTT
CTCGGCAATA CCGTTGCCGG AGGTGGTAGC GCAATTCCGA TAGCCGACAG CGGCGGAACC
GGTCCCATTC AACATCAGTG GCCACCGCAT CCCAACCCCG TGACTGGAAG CAACTTGTTT
CCGGTGGCAG GTTATGCGAT CTGGTGGCAA GCCAATGAAT CGAAGCAGCT TTCCCAGACC
CTCATTGCCT GGGCCAAACA CGATGGGCAC GGTCACAAGC ACGCCGATGA AGGATCGGTG
CTTTTCTGGT CTGGCGGTGT CGACTGGCTC ACCAATACGG GCTACTGGCC CTATGGTGCG
CGCAATGAGG AAGCGGCCTA CTCCTGGACC GGCTCCAATG CGCCCCATCA GCCAGGTGAA
GAATTTCTTG TTCCTCGTTC TGTTCAACTC CTGAAAACCG GCGAGGCGTC CGGCGTTAGC
TTCATTGAAG TTGAGCGGCG CAATACGGAT GGTGCGCAGT TTCGACGTCA GGTTTTACAA
ATTGATGCGC AGACCTTGTT GGTGCTGGAT TTCGCCCAGG GGGTTCCAAA GGGCATTGAA
ACAATCTGGA CAGTTGACCC CACACTTCGC TTGTCACCTG GTGCAACAGC CAGCAATTTC
ATCAGTACCC CCGTGCCTGA TGGTCGGCAT CTGATGATCA GCTACACCAA CCACACCGCG
GTCAGGGTTC AAATTCGTCG TGGTTCTGAG CGTCCATTTG CGGGCTGGGT GGTTGTTGAT
GGCAGGCCAA CGCAGGCCGA TGCTCTGCAA ATTGTTGACC CCGCAAGCAA TTCGGCGAGT
GCCATTCTGT TTCGGGTTGC GTCAGGCTCA ATGGACGCCG CACAAAAAAT CTCGATTGAA
ACGGGGGCGA CGGCAGATCA CTGGGCCGTC TTGGTGGAGG GTGCTGGGGA ACTCAAACGT
GTAAGCCGAC AAGACACGAC TATCACGATG GGTCATGTGG CAAATTCAAC GAATCCGGCC
GATTCACTGC TTGTGCCTTT GCGGCCTGCG CCAGACGTTG CTGTCGAGCG TGCAGCGCTG
ACGCGCGCCT ATGCGAACGC CGTCAAAACC TATCCCCCTT GGCGGGAGCT GACGCGCTAC
AGGTTGCGCT TGTCTTATGC GCTGGCTATC CTTGCCCTTC TTGTGGAGTT GGGGTGTTTT
GCCATTTCAA AACTGGCAGG CGTCGTAACC AGGCGGCAAT TTTTCTACGC CCACCTGGGT
ATGACCTTGT GCTGGGCGGC TATTGCGGTG TGGATAGTCC AGTTCTATTT GCGGTGA
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| Protein sequence | MRDRILYYCW RLALPFAVVA AVWIPHFSHY RIDRSPVSWE AAQASAQAPT PAVLDEISGQ
ALGARFGIPD EKILGIAEQI LVGTLAVPSF LEAPMALQGY PIDYQRGSSS LQLVMASLEV
ERVLLSAFEQ THDRRFLDLA TRRVLDFAAH EAGQRQGDGF LWNDHAVAGR ISVLAKLWRL
VRESPELPIA SSRQILSLVE RSGRLLAKPT QFTVRTNHGV AQNLALLQIA AAFPALPESG
AWRRLAVQRL NVQLPFYVSR EGVILEHSAN YHLFGTELLT MAVRLSVLNG LKPEPALVDA
ARTSRQVLAR LMRPDGTLPV LGNTVAGGGS AIPIADSGGT GPIQHQWPPH PNPVTGSNLF
PVAGYAIWWQ ANESKQLSQT LIAWAKHDGH GHKHADEGSV LFWSGGVDWL TNTGYWPYGA
RNEEAAYSWT GSNAPHQPGE EFLVPRSVQL LKTGEASGVS FIEVERRNTD GAQFRRQVLQ
IDAQTLLVLD FAQGVPKGIE TIWTVDPTLR LSPGATASNF ISTPVPDGRH LMISYTNHTA
VRVQIRRGSE RPFAGWVVVD GRPTQADALQ IVDPASNSAS AILFRVASGS MDAAQKISIE
TGATADHWAV LVEGAGELKR VSRQDTTITM GHVANSTNPA DSLLVPLRPA PDVAVERAAL
TRAYANAVKT YPPWRELTRY RLRLSYALAI LALLVELGCF AISKLAGVVT RRQFFYAHLG
MTLCWAAIAV WIVQFYLR
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