Gene Rfer_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0679 
Symbol 
ID3963825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp708539 
End bp710053 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content57% 
IMG OID637915510 
Producthypothetical protein 
Protein accessionYP_521961 
Protein GI89899490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCATA GTGCAAAGGA GGAATCCAAA GTGTTGAATA AACCAGGTTA CGCGCTGGTC 
TTGGCCGGCT GTCTTGCGTG TGCTTCAGTG GTTGTCGCGA TGCCCGACTC GTTTCTTCTC
GGTGACGGAG CGGCCGGGCC GACCTGTGCG AACTACGTGA CCATGGGAGG TATGGCATGG
AGTCGTGCTG GCGGTGACTG GGTTGATGCA GCGGGGACTT TGTACGGCGA CCAAGCTTTT
TCCACTCACT CGGTGCCGCT GGGCAAAGGG CGGCAGATCG AAGACTGGGA TGTGACCGAA
CTGGTACGGG CTTGGCTTGA CGGGCGCTAT CCCAACGCCG GTATGTTGTT GCGGGTCAAG
CCGGGAGTCA AGAACGGCGT GGTGGATTTC CACAGCCGAG AGTCGCCAGA TGCAAGCGCT
CGTCCCGTTC TCAAGCTGCA ATGGTCGGAC GGCTCGCAGA CCAGACTGTC ACCGGCTGCA
GATACCTATC TTGACTGCAC CTCGCTGTCC AGTTTGGGTG AAAAGCCCAG TATAAAAATC
AGTGGCTTGC AAAGTGCGCT GTTGCGATTT GACCTGAAGA AAACAAATGC ACGCTTGCAG
CAGGCTGTTC TCACCCTTGT CTCTGACATG CAGTACGCGA GTGGCACCGA CATTGGGGTC
TACCGCGCAG CCCCGCCCTA TACGCGGATG CCAGCCAATA CTTTGACGGG CCTGGCGAAG
GACTACGCTC GAGATATGGG CATTGAAAAG AACCCTGATG TCGTGTTTGC AACCGGCTTC
GAAAGCCCGG TCTGGCTCAC CGAGTGGGGT TATTTCGGTC CGCGAAGTAC AGCCGAGGCG
ATTGCCGAAG ACGCTGCCAG ACGATTCGAG CCGTTTTCTG GGCGGGCATT GCGCGTTCGA
CTGGTTAAAG GTCAGAACCT CGGCCTCGAT TTGCGCTACC TGTTTGCCAA AGGAGGCAAG
CCTGAACCAG AGGAAATCTA TTTCCGCTAC TACCTGCGGT TCGCCGATGA CTGGAACCCG
TACGCTGACG GTGGCAAGAT GCCTGGCATT GCCGGAACCT ATGACCGCGC CGGCTGGGGC
ATGCGCAAGT CGGACGGTTA CAACGGTTGG TCGGTTCGTG GCGGTTTTGC GCCCCGACCA
CCTGTGGACA AGTCTGTAGC TCGCCTGACT GCCATGGGTT CGTACTCGTA TCACGCCGAT
ACGGGTGAGT CCGGAGACTA CTGGGGCTGG AATGAAGGTC CGTCAGGCCT GCTGGAAAAC
AATCGCTGGT ATTCCGTGGA GCAGTACGTC AAGCTCAATA CGCCCGGCGT GCGCGACGGT
GTATTTCGGG CCTGGATTGA CGGTCGGCAG GTGCTGGAAA AAACAACAAT TCTGTTTCGC
CATACGCGCG ACTTGAAGAT TGAGAATGTC TGGATGAATA TCTACCATGG AGGTACGACG
CCCGCGCCAC AGGATATGAC GCTGTACATT GACAACGTGG TGATTGCCCG ACGCTACATT
GGCCCGGTCA AATGA
 
Protein sequence
MVHSAKEESK VLNKPGYALV LAGCLACASV VVAMPDSFLL GDGAAGPTCA NYVTMGGMAW 
SRAGGDWVDA AGTLYGDQAF STHSVPLGKG RQIEDWDVTE LVRAWLDGRY PNAGMLLRVK
PGVKNGVVDF HSRESPDASA RPVLKLQWSD GSQTRLSPAA DTYLDCTSLS SLGEKPSIKI
SGLQSALLRF DLKKTNARLQ QAVLTLVSDM QYASGTDIGV YRAAPPYTRM PANTLTGLAK
DYARDMGIEK NPDVVFATGF ESPVWLTEWG YFGPRSTAEA IAEDAARRFE PFSGRALRVR
LVKGQNLGLD LRYLFAKGGK PEPEEIYFRY YLRFADDWNP YADGGKMPGI AGTYDRAGWG
MRKSDGYNGW SVRGGFAPRP PVDKSVARLT AMGSYSYHAD TGESGDYWGW NEGPSGLLEN
NRWYSVEQYV KLNTPGVRDG VFRAWIDGRQ VLEKTTILFR HTRDLKIENV WMNIYHGGTT
PAPQDMTLYI DNVVIARRYI GPVK