| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0678 |
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| Symbol | |
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| ID | 3963824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 707541 |
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| End bp | 708509 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637915509 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_521960 |
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| Protein GI | 89899489 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATGG CTTTGAAAGG TGCGTTTGGC ATGTTATCTC CCGGCGGACC GCGAGGCCGC
CTGTCCATTT TTATTTTTCA TCGGGTGCTG TCGCAAAAAG ACCCGCTGTT TCCCGATGAG
CCTGATGCCC GTCGCTTCGA CGAAATTCTG GGTTGGCTGA GCAAATGGTT CCAAGTCCTT
CCGCTTGACA AGGCGGTCAT GCAGCTTCGC GCCGGTACGC TGCCCGCGCG TTCTGCCGCC
ATCACCTTTG ATGATGGTTA TGCAGATAAC GCCACCAACG CAATGCCGAT ACTGAAGCGA
CATGGTCTGT CGGCCACCTT CTTTGTGGCC ACCTCCTTCA TGGATGGCGG ACGGATGTGG
AATGACACGC TCATAGAGGC GATACGAAAA TGTCAAAACG ACTCGCTTGA TTTGAGCGAC
GCCGGCTTCG GGCACTTCAA GCTGACGTCT GTCGCAGACA GACGCCTTGC CATTGAGTCC
TTGCTGGGGC GCATCAAGTA CCTCGCGCAC GACCAGCGCA GTCAGGCGGT AGCGCAGGTG
CAGCGAGCCG TGCCGATTGC TTTGCCTGAC GACTTGATGA TGACATCCGG ACAAGTCATT
CAGTTGCGCG ACGCAGGTAT GCAAGTGGGT GCGCACACTT GCTCCCATCC CATTCTGGCG
AACTTGACAG ACAGTGAGGC CATGGCAGAG ATAACGGACA GCAAGATGGC GCTTGAATCA
TTGTTAAATG AGCCGGTTTC CTTGTTCGCT TACCCCAACG GCAAACCGGG CACGGACTAC
TGTGGAAAAC ACGCTGCAAT GGTTCGCCAA GCCGGGTTTG CCGCAGCGGT ATCGACTGCG
TCGGGCGTGT CATCAGCGGT GACTGATCCC TTTCAGTTGC CACGCTTCAC GCCGTGGGAC
CGTACGCAGC TGCGGTATGG CATCCGGTTG ATGCTCAACC TGCGTGCAGC CGCGCCGCAG
GTGGCGTAG
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| Protein sequence | MTMALKGAFG MLSPGGPRGR LSIFIFHRVL SQKDPLFPDE PDARRFDEIL GWLSKWFQVL
PLDKAVMQLR AGTLPARSAA ITFDDGYADN ATNAMPILKR HGLSATFFVA TSFMDGGRMW
NDTLIEAIRK CQNDSLDLSD AGFGHFKLTS VADRRLAIES LLGRIKYLAH DQRSQAVAQV
QRAVPIALPD DLMMTSGQVI QLRDAGMQVG AHTCSHPILA NLTDSEAMAE ITDSKMALES
LLNEPVSLFA YPNGKPGTDY CGKHAAMVRQ AGFAAAVSTA SGVSSAVTDP FQLPRFTPWD
RTQLRYGIRL MLNLRAAAPQ VA
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