| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0668 |
|---|
| Symbol | |
|---|
| ID | 3963853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 693905 |
|---|
| End bp | 695083 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637915499 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_521950 |
|---|
| Protein GI | 89899479 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | [TIGR03088] sugar transferase, PEP-CTERM/EpsH1 system associated |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACC GTCGCCCCCT CGTGCTGCAT GTGATGCACC GCTTTGACAC CGGCGGGCTG
GAGAACGGTA TTGTCAATCT CATTAACCAC ATGCCACCGT ACGCCTACCG TCACGCTGTG
CTGGCCCTGA CCGAGGTAAC GGAGTTCTGC CAGCGCATCC AGCGTGGCGA CGTGGAGTTC
ATTTCACTGC ACAAACCGCC AGGCCACGGT GTCTGGCAAT TCCCTAAACT GTTCAAGTTG
TTCCGTCAGC TGCGCCCCAC GATTGTCCAC AGCCGCAACC TCGCGGCGCT GGAGGCGCAG
GCCCCAGCCT GGGCGGCCGG TGTGCCAGTT CGCATTCATG GTGAGCACGG CCGCGACGTG
GGAGACCTGG ATGGCAGCAA CGTCACCTAC CAGCGCGTGC GCCGTTTCTA CAAGCCCTTC
GTTCACCAGT ACACGGCGCT GTCGCGTGAT CTGGCTGACT ATTTGGTAGA CAAGGTGCAC
GTGTCACCGG ACGCTATCAC TCAGGCCTGC AACGGGGTCG ATACCGAACG CTTCCACCCG
TCTCCCGGTG GCGTGCAGCC CATCGCCGGT TGCCCTTTTG ATCCGGCGCA GCACTGCCTG
GTGGGTACCG TCGGCCGTAT GCAGACCGTC AAGGACCAGC TCACGCTGGC GCATGCTTTC
GTGCAAGCTC TGACCCTGGC TCCTGAACTC CGGCAACGCA TGCGATTAAT CATGGTGGGG
GAGGGGCCGT TGCGCGCGCA GGTCCAGGAT GTGCTGGACA CAGCAGGCTT GGGAGCGCTG
GCTTGGCTGC CCGGTGAGCG CAACGACGTG CCAGACATCA TGCGTGGCCT TCATGTTTTT
GCCTTGCCGT CACTGGCCGA GGGCATCTCG AACACGATAC TGGAGGCCAT GGCCAGTGGC
TTGGTTGTCG TTGCGACGGC AGTGGGCGGC AATGCCGACC TGGTGCTGCA GGGACAGACC
GGCTACCTTG TTGCTTCTTC TGATCCGCAG GCCATGGCCC TGCGCCTGGT GGCACTGGCC
TTAAATCCGC AGCGGGTCCA CAGCATGGGG CAGGCTGGTC GTCAACGGGC GCAGACCACC
TTCAGCCTGC AGGCCATGGT CAGTACCTAC CAGTCGGTGT ACGACCAGCA GTTGCGCCGC
CTGCGCCCTG TGCCGTTTGC CCAGCAGCAA CACCCATAG
|
|---|
| Protein sequence | MTDRRPLVLH VMHRFDTGGL ENGIVNLINH MPPYAYRHAV LALTEVTEFC QRIQRGDVEF
ISLHKPPGHG VWQFPKLFKL FRQLRPTIVH SRNLAALEAQ APAWAAGVPV RIHGEHGRDV
GDLDGSNVTY QRVRRFYKPF VHQYTALSRD LADYLVDKVH VSPDAITQAC NGVDTERFHP
SPGGVQPIAG CPFDPAQHCL VGTVGRMQTV KDQLTLAHAF VQALTLAPEL RQRMRLIMVG
EGPLRAQVQD VLDTAGLGAL AWLPGERNDV PDIMRGLHVF ALPSLAEGIS NTILEAMASG
LVVVATAVGG NADLVLQGQT GYLVASSDPQ AMALRLVALA LNPQRVHSMG QAGRQRAQTT
FSLQAMVSTY QSVYDQQLRR LRPVPFAQQQ HP
|
|---|
| |