Gene Rfer_0665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0665 
Symbol 
ID3963850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp689820 
End bp690857 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content56% 
IMG OID637915496 
Producthypothetical protein 
Protein accessionYP_521947 
Protein GI89899476 
COG category[V] Defense mechanisms 
COG ID[COG2348] Uncharacterized protein involved in methicillin resistance 
TIGRFAM ID[TIGR03019] FemAB-related protein, PEP-CTERM system-associated 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0449506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAACA TCAAGCGTCT CATGCCTGCG GACATTGCCA CGACCAAGCG GTGGGACGCG 
TTTGTCATGG CGTGCCCGGA GGCGACTTTT TTTCATCGCG CCGGCTGGCA GAAAATTGTG
CAAGATATTT TTCATCATGA CACCTACTTT CTGTATGCCG AGTCCGATGA AGGCGTTCAG
GGTGTACTGC CGCTGGGTCA TGTCAACAGT TGGTTTTTTG GCAACTCGCT GGCAGGTTTG
CCGTTTGCTG TGTATGGCGG CATCGCCGCT GCCAATGAGC AGGTGGCGCA AGCCCTGGAG
CATGAAGCAC AACAGATTGC CAGGCGACTG GGGGTGGCGC ATCTTGAATG GCGCAACATC
AATCCGCGCC ATGCAGACTG GCCCAGGCAA GACCTGTATG TCACGTTTCG CAAGGAAATT
CTGGCTGACG ACGACGCCAA TTTGTTGGCC ATTCCGCGCA AGCAGCGGGC CATGGTACGC
AAAGGTATCA AGAATAGACT GGTAAGCACG ATTGACCCTG ACGTGGAGCG CTTTTTTGCC
CTTTATGCCG ACAACGTTCG CCGTCATGGC ACGCCCGCTT TGCCCAAGCG TTACTTTCAG
GCCTTACAGG CCGAATTTGG TGCAGATTGC GAGGTGCTGA CGGTTAGTGC CCCCGATGGC
AGGGCATTGA GCAGTGTGTT GAGTTTTTAC TTTCGGGGCG AGGTCTTGCC CTACTATGCG
GGCGACTTTG AGCCCGCGCG CGACCTCGCT GCCAACGATT TCAAATACTG GGAGTTGATG
CGCCGCGCCT GTGCGCGCGG ACTCAAAGTG TTTGACTATG GACGCAGCAA GCTGGGGACC
GGCTCCTACG CCTTCAAAAG AAACTGGGGT TTTGAGCCCA CGCCGCTGCA CTATGAATAT
TGTCTTTACA AGCGCGATGA CGTGCCACAA AACAACCCGT CCAATGCCAG ATACAAGCTG
TTGATCGCCA CGTGGCGGCG TTTGCCCCTG GCGGTTGCAA ACTGGTTGGG CCCTTTCGTT
GTGCGCAACC TGGGCTGA
 
Protein sequence
MLNIKRLMPA DIATTKRWDA FVMACPEATF FHRAGWQKIV QDIFHHDTYF LYAESDEGVQ 
GVLPLGHVNS WFFGNSLAGL PFAVYGGIAA ANEQVAQALE HEAQQIARRL GVAHLEWRNI
NPRHADWPRQ DLYVTFRKEI LADDDANLLA IPRKQRAMVR KGIKNRLVST IDPDVERFFA
LYADNVRRHG TPALPKRYFQ ALQAEFGADC EVLTVSAPDG RALSSVLSFY FRGEVLPYYA
GDFEPARDLA ANDFKYWELM RRACARGLKV FDYGRSKLGT GSYAFKRNWG FEPTPLHYEY
CLYKRDDVPQ NNPSNARYKL LIATWRRLPL AVANWLGPFV VRNLG