| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0664 |
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| Symbol | |
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| ID | 3963849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 688937 |
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| End bp | 689812 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637915495 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_521946 |
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| Protein GI | 89899475 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0290858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGACG CCCCGCCAGT CGAGCCCGTC ACCAATGCGT TGACCATTGA TGTGGAAGAT
TATTTCCAGG TCTCGGCATT TGCGCCGCAT ATTGCCCGCT CCGAGTGGAA TCTGCGTGAG
TGCCGAGTCG AACGCAATGT TGACTGCATC CTCGAAATGC TCGCTAACAG CGATACCAAG
GCAACATTTT TTACGCTCGG CTGGATCGCA GAGCGATATC CTGAGCTGGT GCGACACATC
GTGCGCGAAG GGCATGAGCT GGCCAGCCAT GGCTACGGCC ACGAGCGCGC CAGCGATCAA
ACCGAAGCGG CATTTTTTGC CGATATTCAG CTAGCCAAGA TCGTCCTGGA AGATCTGTCG
GGCAGTGAAG TGAATGGGTA TCGCGCGCCG AGTTTTTCCA TTGGTAGTGG CAATCTCTGG
GCCTTTGACT GCCTGGCTCG GGCCGGCTAC CGCTACAGCT CCAGCGTCTA CCCGATCCGG
CATGACCACT ACGGCATGCC AGAGTCGCCG CGTTTTGCCT ATGAAGTGCG TCCGGGGTTG
ATGGAAATCC CGATTACCAC GTTGCGGGTA TTCAACCGCA ACTTGCCATC CAGTGGCGGA
GGCTACTTCA GATTGCTGCC CTATGCCTGG TCACGCTGGA TGCTCAGCCG GGTGAACGGC
CATGAGCATG AGTCAGGTGT CTTCTATTTC CATCCCTGGG AGATCGACCC CGGACAGCCG
CGCATTGATG GCATCAGCAG CAAGACGCGC TTTCGTCATT ACTTCAATAT CGACCGGATG
GAAGGACGTT TGAATCAACT GCTGGGGGAC TTCAAGTGGG GTCGCATGGA TCAGATTTTT
CTGGACCGAT TCAGTCAACC TGTGAGCGTC GCTTGA
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| Protein sequence | MKDAPPVEPV TNALTIDVED YFQVSAFAPH IARSEWNLRE CRVERNVDCI LEMLANSDTK
ATFFTLGWIA ERYPELVRHI VREGHELASH GYGHERASDQ TEAAFFADIQ LAKIVLEDLS
GSEVNGYRAP SFSIGSGNLW AFDCLARAGY RYSSSVYPIR HDHYGMPESP RFAYEVRPGL
MEIPITTLRV FNRNLPSSGG GYFRLLPYAW SRWMLSRVNG HEHESGVFYF HPWEIDPGQP
RIDGISSKTR FRHYFNIDRM EGRLNQLLGD FKWGRMDQIF LDRFSQPVSV A
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