Gene Rfer_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0650 
Symbol 
ID3963893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp674234 
End bp674992 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content69% 
IMG OID637915481 
Productputative hydratase 
Protein accessionYP_521932 
Protein GI89899461 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCC GCCCCGATAC CCAAACACTG ATCACGGCCC TCACCCGAGC CCGCCTGAGC 
GGGCAGCGAC TATGTGCCGC TGACTGGGTC GGCGCGGTCC ACAGCGAGGC CGATGCCTAC
GCGGTTCAGG ACGGCGTGGC CACGGCACTT GGCTGGGCCG AAGGTCCGCT GGTGCGGCAC
TGGAAGTCCG GCGGCAGCAC CCGATCTGGC CCATTCAGCC ATGCGCCGTT GGACCCGGCG
GCCATCAACC CAGCGGGCAA GACTGGGCTG CTGCTGGGCG TGGAGGCCGA GGTGGCGCTG
CGCCTGGGCC GCGATGTCAG CCCCGAGGCG GCACGCGCCA TGAAGTCTGA GACCGCCGGG
GACTGGGTCG ATGCGATGGC CGTTGCGGTG GAGTTGGTGG CATCGCGCTG GACCGAGGGG
CTGGCCGCGC CGGAGCTTCT GCGCATGGCG GACCATCAAT CGAATGCCGG TCTGATGCTG
GGTATTTGGC AGCCCTATGC GGCGCGCGAT TGGTCGGCCC AGACCTGCCA AGTGAAGGTC
GGCAGCCAGA CGCCGGTCAC CTGTACCGGC AGTCATTCAC TGAACGACCC GGCCTGGCTT
CTGCCCGCCT GGTTGCAGCA CCTGACCCGC CATGGGACCA CGGTCGCGGC CGGCACCGTG
GTGACCACAG GCTCCTGGGT CGGCTGCCTG CCCATCCAGC CGGATGATCG CGTCAGCGTC
GACTTTGCGG GCCTGGGTCA TCTGACGGTA GGGCTGTAG
 
Protein sequence
MSIRPDTQTL ITALTRARLS GQRLCAADWV GAVHSEADAY AVQDGVATAL GWAEGPLVRH 
WKSGGSTRSG PFSHAPLDPA AINPAGKTGL LLGVEAEVAL RLGRDVSPEA ARAMKSETAG
DWVDAMAVAV ELVASRWTEG LAAPELLRMA DHQSNAGLML GIWQPYAARD WSAQTCQVKV
GSQTPVTCTG SHSLNDPAWL LPAWLQHLTR HGTTVAAGTV VTTGSWVGCL PIQPDDRVSV
DFAGLGHLTV GL