| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0645 |
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| Symbol | prfC |
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| ID | 3963888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 667781 |
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| End bp | 669412 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915476 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_521927 |
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| Protein GI | 89899456 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.563471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTACA CTGCCGAAAC CCGCCGCCGC CGCACCTTTG CCATCATTTC CCACCCCGAC
GCGGGCAAGA CCACGCTGAC CGAAAAGCTG TTGCTGTTCT CGGGCGCGAT CCAGATCGCC
GGCTCGGTGA AAGCGCGCAA GGCCACGCGC CACGCCACCA GCGACTGGAT GGAAATCGAG
AAGCAGCGCG GCATTTCGGT GGCCTCCAGC GTGATGCAAA TGGTCTACCG CGACCATGTC
ATCAATCTGC TCGACACGCC CGGCCACAAA GACTTCTCCG AGGACACCTA CCGCGTGCTG
ACCGCCGTGG ACTCGGCGCT GATGGTGATT GACGCGGCCA ACGGCGTGGA GTCGCAAACC
CGCCGCCTGA TCGAGGTCTG CCGCCAGCGC GACACGCCCA TCATCACCTT CATCAACAAG
ATGGACCGCG AGGTGCGCGA TCCACTGGAC ATTCTGGACG AAGTCGAGCG TGAACTCGGC
ATGCCCTGCG TGCCCATGAC CTGGCCGGTG GGCCAGGGCA AGACCTTTGG CGGCATCATC
AACCTGCGCA CGCAGGTCAT GACGGTGTTC GAATCGGGTA GCGAGCGCTT GCCGCACGAC
TTTGACGCCA TGCCCTTGTC TGACCCGGCG GCCCTCAAAG CCCGCTTTGG CAGCGAGTGG
GACACGGCGC TGGAGAGCAT GGAACTGGCC ACCGGAGCCT CGCCCGCCTT TGACCGCGAA
GCCTTTCTGG CCGGAAAACA AACCCCGGTG TTTTTTGGCT CCGGCGTGAA CAACTTTGGC
GTGATGGAAG TGCTGGACGC CCTGGTGGAC CTGGCGCCGT CGCCGGGTCC GCGCACCAGC
TCCTTCATCG TCAACAAACA GCCCGTCATC AAGCAGGTGC AACCCGAAGA CGATGCGTTC
TCCGGCGTGG TATTCAAGGT GCAGGCCAAT ATGGATGCGA ACCACCGCGA CCGCATCGCC
TTTGTGCGCA TCGCCTCGGG CAAGTACTCG CCGGGCATGA AGCTCAAGGT GATGCGCACC
GGCAAGGAAC TGCGCCCCAC CAGCGTGGTG ACCTTCATGA GCCAACGCCG CGAGGCGGTC
GAAGAAGCCT ACGCCGGGGA CATCGTGGGC TTTACCACGC ACGGCGGCGT GCAACTGGGC
GACACCATCA CCGATGGCTC TGTCAACCTG CTGTTCACGG GTTTGCCGTT TTTTGCGCCC
GAGATGTTCA TGACCGTGGT GCTGAAAAAC CCGCTGCGCA CCAAACAATT GCAGCAGGGA
CTGGCTCAGC TCGGTGAGGA AGGCGCCATT CAGGTGTTCC GGCCCGAGAT GGGCGGCAAT
ATGCTGCTCG GGGCCATCGG CCAATTGCAG TTTGAAGTGG TGCAGCACCG CCTGAAGGGG
GAATACGATG CCGACATCCG CCTGGAAGCA AGCCAGTACA CCGGCGCGCG CTGGATCACC
GCTGACTCAC CGGCAGAGCT GAAAGAATTC GTCCACGCCT ACCCGCAGCG CATGGCGCGT
GATGCCGCCG ACACGCTGGC CTACTTGTGC ACCAGCCCCT ACGACGTGCG CCTGGCGCAG
GAGCGTTTTC CGAAAATCCA CTTTCACCCG CTGCGCGAGC ACGCCGGCTT GGCGCTGCAA
AGCGCGGCTT GA
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| Protein sequence | MSYTAETRRR RTFAIISHPD AGKTTLTEKL LLFSGAIQIA GSVKARKATR HATSDWMEIE
KQRGISVASS VMQMVYRDHV INLLDTPGHK DFSEDTYRVL TAVDSALMVI DAANGVESQT
RRLIEVCRQR DTPIITFINK MDREVRDPLD ILDEVERELG MPCVPMTWPV GQGKTFGGII
NLRTQVMTVF ESGSERLPHD FDAMPLSDPA ALKARFGSEW DTALESMELA TGASPAFDRE
AFLAGKQTPV FFGSGVNNFG VMEVLDALVD LAPSPGPRTS SFIVNKQPVI KQVQPEDDAF
SGVVFKVQAN MDANHRDRIA FVRIASGKYS PGMKLKVMRT GKELRPTSVV TFMSQRREAV
EEAYAGDIVG FTTHGGVQLG DTITDGSVNL LFTGLPFFAP EMFMTVVLKN PLRTKQLQQG
LAQLGEEGAI QVFRPEMGGN MLLGAIGQLQ FEVVQHRLKG EYDADIRLEA SQYTGARWIT
ADSPAELKEF VHAYPQRMAR DAADTLAYLC TSPYDVRLAQ ERFPKIHFHP LREHAGLALQ
SAA
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