Gene Rfer_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0620 
Symbol 
ID3963938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp644055 
End bp645221 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content65% 
IMG OID637915450 
Productcitrate utilization protein B 
Protein accessionYP_521902 
Protein GI89899431 
COG category 
COG ID 
TIGRFAM ID[TIGR02484] CitB domain protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCGT ACACTCGCGC CGCCAGCTTT CTTGTTGATG CTCCCGCACT GGCCGGTGGC 
AAAACGAATG ACGAATCCAT GCTGACGGCA CCCGAAACCG AAGTATCCCG CCTCCTGCAT
ATCTGCAACG ACTGCCACTA TTGCGACAGT TTTTGTGCGG TGTTCCCCTC CAGCTCGCGG
CGGCTCCAGT TTGCCAAGGC CGACATTCAC TACCTGGCCA ATCTTTGCCA CAACTGTGGC
GCCTGCCTGC ACGGCTGCGA GGTCGCCCCG CCGCACGAGT TGGCGGTCAA CCTGCCGCAG
GCCATGGCCC GCGTGCGTGG CCAGACCTAT GCGGACTATG CCTGGCCACC GGCCTTGGGC
GCACTTTACC AACGCCATGG TCTGGTGCTG TCGCTGGCAC TGGCGGGTGC GCTGACCATC
TTTTTGCTGC TGGCGCTGGC CTTGAATGGC ACGCTCTTGG GCTCACCCCA GGCTGGGTAC
AGCGCGGTGT TTGGGCACCA GATGCTGGTC GGTTTGTTTG CGCCGGTTTT CCTGTATGCC
GTGTTGGCAC TGGGCATGGG GGTGCGGCGT TTCTGGCACG ACGTGACGCC GGCCACCAGC
GGCCAGTCAG TCAGCGCCGC AGCCGCTGGC GAGGCCGCCC GTGACGTCTT GCGCCTGAAA
TACCTGGACG GTGGCCACGG CGACGGCTGC AACAATGCCG ACGGTACGGC CACGCTGGCC
CGGCGCCGGG CCCACCATCT GACCTTTTAC GGCGTCTTGC TGTGCTTGGC CGCCACCTTG
GCGGCGAGCG TCTATCACTA TGTCCTGGGC TGGACGGCGC CCTACGACTT GCCGCAACTG
CCCAAACTGC TGGGTGTCGC CGGCGGGCTG AGTCTGCTGC TTGGCACGGG TAGCTTGTTT
GCACTGAACC TGCAGCGCCA CCCTTTGCAC GGCGATGCGG CGCAAAAACC GATGGACCGC
GGCTTTATCG CGCTGCTCTT TTGCGCCAGC GCCAGCGGCC TGGCCCTGTG GTGGGTGCAC
GCCGGGGTGG CCCTGCCAGC CCTTCTGACC CTGCACCTGG GGCTTGTGAT GGCGCTGTTT
GCCACGCTGC CTTATGGCAA GTTTGCACAC GGTATTTTCC GAACCGCCGC GCTCTTGCGC
CATGCGGTCG AAAAGCGCCA GACCTAG
 
Protein sequence
MLPYTRAASF LVDAPALAGG KTNDESMLTA PETEVSRLLH ICNDCHYCDS FCAVFPSSSR 
RLQFAKADIH YLANLCHNCG ACLHGCEVAP PHELAVNLPQ AMARVRGQTY ADYAWPPALG
ALYQRHGLVL SLALAGALTI FLLLALALNG TLLGSPQAGY SAVFGHQMLV GLFAPVFLYA
VLALGMGVRR FWHDVTPATS GQSVSAAAAG EAARDVLRLK YLDGGHGDGC NNADGTATLA
RRRAHHLTFY GVLLCLAATL AASVYHYVLG WTAPYDLPQL PKLLGVAGGL SLLLGTGSLF
ALNLQRHPLH GDAAQKPMDR GFIALLFCAS ASGLALWWVH AGVALPALLT LHLGLVMALF
ATLPYGKFAH GIFRTAALLR HAVEKRQT