Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0620 |
Symbol | |
ID | 3963938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 644055 |
End bp | 645221 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637915450 |
Product | citrate utilization protein B |
Protein accession | YP_521902 |
Protein GI | 89899431 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02484] CitB domain protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCCGT ACACTCGCGC CGCCAGCTTT CTTGTTGATG CTCCCGCACT GGCCGGTGGC AAAACGAATG ACGAATCCAT GCTGACGGCA CCCGAAACCG AAGTATCCCG CCTCCTGCAT ATCTGCAACG ACTGCCACTA TTGCGACAGT TTTTGTGCGG TGTTCCCCTC CAGCTCGCGG CGGCTCCAGT TTGCCAAGGC CGACATTCAC TACCTGGCCA ATCTTTGCCA CAACTGTGGC GCCTGCCTGC ACGGCTGCGA GGTCGCCCCG CCGCACGAGT TGGCGGTCAA CCTGCCGCAG GCCATGGCCC GCGTGCGTGG CCAGACCTAT GCGGACTATG CCTGGCCACC GGCCTTGGGC GCACTTTACC AACGCCATGG TCTGGTGCTG TCGCTGGCAC TGGCGGGTGC GCTGACCATC TTTTTGCTGC TGGCGCTGGC CTTGAATGGC ACGCTCTTGG GCTCACCCCA GGCTGGGTAC AGCGCGGTGT TTGGGCACCA GATGCTGGTC GGTTTGTTTG CGCCGGTTTT CCTGTATGCC GTGTTGGCAC TGGGCATGGG GGTGCGGCGT TTCTGGCACG ACGTGACGCC GGCCACCAGC GGCCAGTCAG TCAGCGCCGC AGCCGCTGGC GAGGCCGCCC GTGACGTCTT GCGCCTGAAA TACCTGGACG GTGGCCACGG CGACGGCTGC AACAATGCCG ACGGTACGGC CACGCTGGCC CGGCGCCGGG CCCACCATCT GACCTTTTAC GGCGTCTTGC TGTGCTTGGC CGCCACCTTG GCGGCGAGCG TCTATCACTA TGTCCTGGGC TGGACGGCGC CCTACGACTT GCCGCAACTG CCCAAACTGC TGGGTGTCGC CGGCGGGCTG AGTCTGCTGC TTGGCACGGG TAGCTTGTTT GCACTGAACC TGCAGCGCCA CCCTTTGCAC GGCGATGCGG CGCAAAAACC GATGGACCGC GGCTTTATCG CGCTGCTCTT TTGCGCCAGC GCCAGCGGCC TGGCCCTGTG GTGGGTGCAC GCCGGGGTGG CCCTGCCAGC CCTTCTGACC CTGCACCTGG GGCTTGTGAT GGCGCTGTTT GCCACGCTGC CTTATGGCAA GTTTGCACAC GGTATTTTCC GAACCGCCGC GCTCTTGCGC CATGCGGTCG AAAAGCGCCA GACCTAG
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Protein sequence | MLPYTRAASF LVDAPALAGG KTNDESMLTA PETEVSRLLH ICNDCHYCDS FCAVFPSSSR RLQFAKADIH YLANLCHNCG ACLHGCEVAP PHELAVNLPQ AMARVRGQTY ADYAWPPALG ALYQRHGLVL SLALAGALTI FLLLALALNG TLLGSPQAGY SAVFGHQMLV GLFAPVFLYA VLALGMGVRR FWHDVTPATS GQSVSAAAAG EAARDVLRLK YLDGGHGDGC NNADGTATLA RRRAHHLTFY GVLLCLAATL AASVYHYVLG WTAPYDLPQL PKLLGVAGGL SLLLGTGSLF ALNLQRHPLH GDAAQKPMDR GFIALLFCAS ASGLALWWVH AGVALPALLT LHLGLVMALF ATLPYGKFAH GIFRTAALLR HAVEKRQT
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