| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0619 |
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| Symbol | |
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| ID | 3963937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 641683 |
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| End bp | 643986 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637915449 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_521901 |
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| Protein GI | 89899430 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAT TCAGACTTTG CCAACTCACT TGCGCCGTGG CCCTGGCGCT GCCTACACTG
GCCCTGCTGA GCGGCCCGGC GCTGGCGGCA GACCTTGCCG CATTCACGCT GGCCCCGATC
ACTGTCACCG GTAGCCCAAG CCATATCAGC CAGCCACTGG GCGCCACAGC CGTTGACCCG
GCCAGCCTGG CGCCCAAACT GTCCGCCACC AGCGACACGG CCAGCCTTTT GCAGGACGTA
CCGGGCTTAA GCCTGTACGG CGCCGGTGGC GTGTCCAGCC TGCCAGCGAT CCACGGCTTG
GCTGATGACC GTTTGCGCAT CAAGGTGGAT GGCATGGACC TGATTGCTTC CTGCCCCAAT
CACATGAATC CGGCGCTGTC TTACATCGAC CCGACCCAGG TGGGCCTGCT CAAGGTCTAT
GCAGGCATCA CGCCAGTGAG CGCGGGTGGT GATTCCATTG GCGGCACCAT TGTTGCGCAG
ACGCGTGCAC CCGAATTTGC CGCACCGGGG CAAGCCGCCA TCACCAAGGG CGAAGTGGGC
ACCTTTTACC GCAGCAATAA CAAGGCAAGA GGCGCCAACG TTTCGGCCAC CTACGCCACG
GAGCAATTCA ACATCAGCTA CAGCGGGGCC ACCAGCCGGG CCGACAACTA CACCGCAGGC
GGCGACTTCA AAAACCATGA CTTCACCGGC CGCGTCGGGC ACACCCTGGG GCGTGATGAA
GTGGGCTCCA CGGCGTATGA CACACGCAAC CACAGCGTGG GGCTGGCTTT CAAGAGCGAC
AACCATCTGT TGGAAGCCAA GCTAGGCTAC CAGGACATGC CGTTTCAGCT CTACCCGAAT
CAGCGCATGG ACATGCTGGG CAACACCCAG AACAGTGTGA ACCTGCGCTA CGCGGGCCAG
TTCGACTGGG GCGCACTGGA GGCGCGTGCC TACCGCGAGA ACGTGGATCA CGTCATGGAT
TTTGGCGCTG ACAAACGCTA CTGGTATGGC GCGGCATCGG GTGGGGGCGC AGCGCTCGAC
GGCACACCCT GCAGCCCGAT CAGCGCCACC TGCGCGGCCG GCATGCCGAT GGTCACCGAA
GGAAAAACCA CAGGCTTGAG CGTCAAAGCC GACGTGGCGC TGACCCCGCA GGATGTGCTG
CGCGTGGGCG CAGAAGCGCA GCAATACCGG CTCAAGGACT GGTGGCCACC GTCAGGTGGG
GGCATGTTTC CGGGCACCTT CTGGAACATC CAGGATGGCC AGCGCGATCG CACGGCCGTC
TTTGGTGAAT GGGAAGCGCG CAAGAACACG CAGTGGATGA CCCTGCTGGG CGCACGAGTT
GAACAGGTCA AAATGAACGC CGGCAATGTG GTGGGCTACA ACCCTGCAGG CGGTGGTTTT
CAAGGTCGTG ACGCCAGCGC CTTCAATGCC CAGGATCGGA GCAAAACCGA CAACAACCTG
GATCTGACCG CACTGGCCCG CTACAGCGCC AATACCAACT ACGACATCGA GTTCGGCTTC
GCCCACAAGG TGCGCTCACC CAATGTGTAT GAGCGCTACA CCTGGTCCAC CTGGCAGATG
GCCGCGCTGA TGAATAATTT TGTTGGTGAT GGCAACGGCT ACCTGGGCGA TGTCAACCTG
AAGCCAGAGA AAGCCAACAC CATTTCCGCC ACCTTCGACT GGCACGCTGC TGACAGCCGT
TGGGGCTTCA AGGCCACGCC TTACTACACC CAGGTGAGCG ATTACATCGA CGCCGTGCAG
TGGAATGCCA GCACCAACTT GGCCGCCACA ACGCTGGCAG CCAACAAGTT CAGCGTCCTC
AAATACGCCA ACCAGTCGGC CCGCCTCTAC GGCATTGACC TCTCCGGCCA CATGCCGCTG
GCCAAGCGTG CTTGGGGTGA CTTTGGGCTC AAAGGCTTGC TGAACTACAC CCATGGCACC
AACCAGGATA CGGGCGATGG CCTGTACAAC GTCATGCCGC TCAACGCCAA ACTCGCGTTG
ACGCAAAAGT TGAAAGCTTG GGACAACAGC TTTGAACTGT TGATGGTGCA GGCCAAGGAC
AGCGTCTCAG GTATGCGCAA TGAAATCAAG ACACCGGGCT ACGGCCTGGT CAATTTGCGC
GGCAGCTATT CGTGGAGACA GGTGCGCGTC GACTTCGGTG TTGAGAATCT CTTCGACAGG
TTCTATTACC TGCCCAACGG CGGTGCCTAT ACCGGGCAAG GGACAACCAT GAGCAACCCG
GCGCTGCCCA ATTACCCGCA ATGGGGTAGC GCCGTGCCGG GTATCGGACG CTCAATTTAC
ATGGGTGTGA ATGTGAAGTT TTGA
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| Protein sequence | MSQFRLCQLT CAVALALPTL ALLSGPALAA DLAAFTLAPI TVTGSPSHIS QPLGATAVDP
ASLAPKLSAT SDTASLLQDV PGLSLYGAGG VSSLPAIHGL ADDRLRIKVD GMDLIASCPN
HMNPALSYID PTQVGLLKVY AGITPVSAGG DSIGGTIVAQ TRAPEFAAPG QAAITKGEVG
TFYRSNNKAR GANVSATYAT EQFNISYSGA TSRADNYTAG GDFKNHDFTG RVGHTLGRDE
VGSTAYDTRN HSVGLAFKSD NHLLEAKLGY QDMPFQLYPN QRMDMLGNTQ NSVNLRYAGQ
FDWGALEARA YRENVDHVMD FGADKRYWYG AASGGGAALD GTPCSPISAT CAAGMPMVTE
GKTTGLSVKA DVALTPQDVL RVGAEAQQYR LKDWWPPSGG GMFPGTFWNI QDGQRDRTAV
FGEWEARKNT QWMTLLGARV EQVKMNAGNV VGYNPAGGGF QGRDASAFNA QDRSKTDNNL
DLTALARYSA NTNYDIEFGF AHKVRSPNVY ERYTWSTWQM AALMNNFVGD GNGYLGDVNL
KPEKANTISA TFDWHAADSR WGFKATPYYT QVSDYIDAVQ WNASTNLAAT TLAANKFSVL
KYANQSARLY GIDLSGHMPL AKRAWGDFGL KGLLNYTHGT NQDTGDGLYN VMPLNAKLAL
TQKLKAWDNS FELLMVQAKD SVSGMRNEIK TPGYGLVNLR GSYSWRQVRV DFGVENLFDR
FYYLPNGGAY TGQGTTMSNP ALPNYPQWGS AVPGIGRSIY MGVNVKF
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