| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0604 |
|---|
| Symbol | |
|---|
| ID | 3963922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 629533 |
|---|
| End bp | 630258 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637915434 |
|---|
| Product | LrgB-like protein |
|---|
| Protein accession | YP_521886 |
|---|
| Protein GI | 89899415 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1346] Putative effector of murein hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAATT TCGTTGAGCT CTGGGTCTAC CTCTCCAGCA CGCCGTTGTT TGGCCTGACC
GCCACGCTGG TGGTGTATGT GCTGGCGCAA GCCGTGTACG TCCGGCTGCA ACAGGCGCCC
TGGGCCAACC CGGTGCTGTG GACGGTGCTC GCCATTGCCA GCGTGCTGCT GGCCACCGGC
GTGAGTTACC CCACTTACTT TGCCGGTGCG CAATTCATTC ATTTCCTGTT GGGCCCGGCG
GTGGTGGCGC TGGCCTGGCC GCTCTGGGAA CGACGCGCCG CCCTGGCGCT GCACTGGCGC
GCCCTGTTGC TGGCGGCCGT GGCAGGCGGC CTGGCGGCCA GCGGCTCGGC GCTGGCGCTG
GGCTGGGCGG CTGGCCTGCC CCTGGACGTG GTGTTGTCGC TGGCGCCCAA ATCGGTCACC
GCACCGGTGG CCATGGGCAT TGCCGACAAG ATTGGCGGCA TTCCCGCCCT GGCGGCCGTG
TTTGCCGTGA TCACCGGCAT GGTGGGGGCC CTGAGTGGCA AATACTTGTT TGCTGCGCTC
AAGATCCCGA CCGACCCGGC GGGCTGGATG GCGCGTGGCT TTTCCCTGGG CACCGCCGCG
CACGGCATCG GCGCCGCCCG GGCGCTGCAG GTCAATGCCG ATGCCGGGGC TTACGCCGGG
CTGGCGCTGG GGCTGCAGGT GGTACTGGCC TCGCTGCTGA TACCGCTGGC GTTCCGGCTG
TTTTGA
|
|---|
| Protein sequence | MPNFVELWVY LSSTPLFGLT ATLVVYVLAQ AVYVRLQQAP WANPVLWTVL AIASVLLATG
VSYPTYFAGA QFIHFLLGPA VVALAWPLWE RRAALALHWR ALLLAAVAGG LAASGSALAL
GWAAGLPLDV VLSLAPKSVT APVAMGIADK IGGIPALAAV FAVITGMVGA LSGKYLFAAL
KIPTDPAGWM ARGFSLGTAA HGIGAARALQ VNADAGAYAG LALGLQVVLA SLLIPLAFRL
F
|
|---|
| |