| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0598 |
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| Symbol | |
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| ID | 3960116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 623934 |
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| End bp | 625412 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915428 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_521880 |
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| Protein GI | 89899409 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCTT TGCTTTCACC TCTTTCCCTG CTCAAAGATC CCACTCTTCT GAAAACCGAT
GCCTTGATCA ATGGCCAATG GGTCAGCGGC TCAAGTCGTT TCGCTGTCAC TGACCCGGCC
ACTGGCGCGC ACCTCGCCGA CGTCGCGAAC CTGGGACCGG CGGAGGCTGA AACAGCCATT
GCGGCTGCCA ACGCCGCCTG GCCGGCCTGG CGCAACAAAA CCGCCAAAGA GCGCAGCATC
ATTTTGCGCA AGTGGTATGA CCTGATCATG GCGAATCAGG ATGACCTGGG GCGCATCATG
ACCGCCGAAG AAGGCAAGCC GCTGCCCGAG GCCAAAGGCG AAATCGCCTA TGGCGCCAGC
TTTGTGGAGT GGTTTGCCGA AGAAGCCAAA CGCATCAACG GCGAGACCTT GCCGCAGTTT
GACAACAACC GCCGCCTGCT GCTGCTGCGC CAGCCGATTG GCGTCTGCGC CGCCATCACG
CCGTGGAACT TTCCGATGGC CATGATCACA CGCAAGGTCT CGCCCGCGCT GGCGGCGGGT
TGCCCGGTGG TCATCAAGCC GGCCGAATTG ACGCCCTTGA GTGCGCTGGC TGTTGCCGAG
CTGGCTTTAC GCGCCGGTAT ACCGGCTGGG GTGCTGAACG TCATCACCGC TGACGCCGAC
AACTCCATTG CCGTGGGCAA GGTTTTTTGC GCCAGCGACG TGGTGCGCCA CATCAGCTTC
ACCGGCTCCA CCGAAGTGGG TCGCATCCTG CTGGCGCAGT CGGCGCCCAC GGTCAAAAAA
CTCTCCCTGG AGTTGGGCGG CAACGCACCC TTCATCGTCT TTGACGATGC CGATATTGAC
AGCGCGGTGG AAGGCGCGTT TGCCAGCAAG TACCGCAATG CCGGGCAAAC CTGCGTCTGC
TCCAATCGTT TCTATGTGCA AGAGGGTGTG TATGACGAAT TTGTGCAGAA GTTCGCCGCC
AAGGTCAAGA CCGCCAAGGT GGGTAACGGC TTTGAGGAAG GCGTCAACCA GGGGCCGCTG
ATTGAAGAAG CTGCACTGCT CAAGGTCGAG CGCCATGTGC AGGATGCGTT GCTAAAAGGT
GCCCGTTTGC TCACTGGCGG CCACCGCTTG CCGGGCCAGT TTTTCGAGCC TACGGTGATG
GCAGACGCCA CGGCCGACAT GCTGTGCGCG CGCGAGGAGA CCTTTGGCCC GTTTGCGCCG
GTGTTCAAGT TCAAAACCGA GCAGGATGCG ATTTTTGCTG CCAACAACAC CGAATTTGGT
TTGGCCAGTT ACTTCTACAG CCGCGACGTG GGCCGCATCT TCCGGGTCAG CGAGGCGCTG
GAGTACGGCA TGGTCGGCAT CAACGTTGGC ATTCTGGCCA CCGAACATGT GCCGTTTGGT
GGCGTCAAGC AGTCCGGTCT GGGGCGCGAG GGTTCGCATT TGGGCATCGA TGACTATGTG
GAGATCAAAT ACCTCTGCAT TGGCGACATC CTCAAATAA
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| Protein sequence | MSALLSPLSL LKDPTLLKTD ALINGQWVSG SSRFAVTDPA TGAHLADVAN LGPAEAETAI
AAANAAWPAW RNKTAKERSI ILRKWYDLIM ANQDDLGRIM TAEEGKPLPE AKGEIAYGAS
FVEWFAEEAK RINGETLPQF DNNRRLLLLR QPIGVCAAIT PWNFPMAMIT RKVSPALAAG
CPVVIKPAEL TPLSALAVAE LALRAGIPAG VLNVITADAD NSIAVGKVFC ASDVVRHISF
TGSTEVGRIL LAQSAPTVKK LSLELGGNAP FIVFDDADID SAVEGAFASK YRNAGQTCVC
SNRFYVQEGV YDEFVQKFAA KVKTAKVGNG FEEGVNQGPL IEEAALLKVE RHVQDALLKG
ARLLTGGHRL PGQFFEPTVM ADATADMLCA REETFGPFAP VFKFKTEQDA IFAANNTEFG
LASYFYSRDV GRIFRVSEAL EYGMVGINVG ILATEHVPFG GVKQSGLGRE GSHLGIDDYV
EIKYLCIGDI LK
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