| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0593 |
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| Symbol | |
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| ID | 3960111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 618556 |
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| End bp | 619638 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637915423 |
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| Product | spermidine/putrescine ABC transporter ATP-binding subunit |
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| Protein accession | YP_521875 |
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| Protein GI | 89899404 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCCC AAGAACTCGT GAAATTTGCC GGCGTTGAAA AAACGTATGA CGGCAAGACC
CTGGTGGTGC GCGATCTCAA CCTTGACATC CGGGCTGGCG AGTTTCTCTC ACTGCTGGGT
CCCTCGGGCT CCGGCAAAAC CACCACCCTG ATGATGCTGG CCGGCTTTGA GTCGCCAACG
GCGGGCGAGA TTTTTTTGAA CGGCAAACCC ATCACCCGCA CGCCACCGCA CAAACGCAAC
TTTGGCATGG TGTTTCAGAA CTACGCACTG TTTCCGCACA TGACCATTGC CGACAACGTG
GCCTACCCCT TGACGGTGCG AAACTTTAGC AAGGCCGAGC GCGAAGCCAA AGTGCTGCGT
GCCTTGGGCA TGGTGCAAAT GGACAACTTG AGCGCCCGCT ATCCGGGGCA ACTCTCGGGC
GGTCAGCAGC AGCGCGTGGC GCTGGCGCGT GCGCTGGTGT TTGATCCCCA GCTGGTGCTG
ATGGATGAGC CGCTGGGTGC GCTGGACAAG CAGTTGCGCG AGCACATGCA GCTCGAGCTC
AAGGCACTGC ACCGTCAGCT CGGCCTGACC TTTGTCTATG TCACGCATGA CCAGTCCGAA
GCCCTGACCA TGTCGGACCG GGTGGCTGTT TTCAGCGATG GCATCATTCA GCAAATCGAC
ATCGTGACCG GCCTGTACGA AACCCCGGCC AATCATTTTG TGGCTGGCTT TGTCGGGGAC
AACACGGTTT TTGATGGCAC CGTTGCGGCG ACACGGGATG GTCAGTGCGA CCTGCGGCTG
GCCAGCGGCA CGGTGCTGAG CGGCCTCAAT GTCAACGCCG CCGCTACCAG CAGCCGGGTG
CATGCCTGTA TCCGGCCGGA ACGTATTGAG GTGCATCCGG CTGGCGCCTC ACCGGGCGTC
AACAGCCTGG AGGCGAAAGT CGGCGACGTC ATTTATTTTG GCGATCACCT GCGGCTGCGC
TGCGCGCTCC CCGGCCAAGT CGATGCCACT GTCAAGATTG CGCTTTCCAG CCCGACCGTC
CCGCAATCCG GGCAAACCGT TTGGCTGCGT TTGCCCCCCG AGCATTTGCG GGTCTATCTT
TGA
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| Protein sequence | MSSQELVKFA GVEKTYDGKT LVVRDLNLDI RAGEFLSLLG PSGSGKTTTL MMLAGFESPT
AGEIFLNGKP ITRTPPHKRN FGMVFQNYAL FPHMTIADNV AYPLTVRNFS KAEREAKVLR
ALGMVQMDNL SARYPGQLSG GQQQRVALAR ALVFDPQLVL MDEPLGALDK QLREHMQLEL
KALHRQLGLT FVYVTHDQSE ALTMSDRVAV FSDGIIQQID IVTGLYETPA NHFVAGFVGD
NTVFDGTVAA TRDGQCDLRL ASGTVLSGLN VNAAATSSRV HACIRPERIE VHPAGASPGV
NSLEAKVGDV IYFGDHLRLR CALPGQVDAT VKIALSSPTV PQSGQTVWLR LPPEHLRVYL
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