Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0592 |
Symbol | |
ID | 3960110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 617152 |
End bp | 618450 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915422 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | YP_521874 |
Protein GI | 89899403 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGCG AATCAAACCT GAAAAATGCA AGCTTGATGG CCCGTCGTCG GGCTGCCGTT CCACGCGGTG TTGGCCAAAG CCACGAGGTG TTTATCGCCC GCGGTGAAAA CGCCGAAATC TGGGATGTGG AAGGTAAACG CTATATTGAC TTTGCCGGCG GCATTGCCGT TCTCAATACC GGGCACTGCA ACCCGACGGT GATCGCCGCC GTCAAGGCCC AGTTGGACCT GTACACCCAC ACCTGCTTCC AGGTTCTGGC CTATGAGCCC TATGTCGAGC TGGCCGAGCG CATCAACGCC CTGGCCCCCG GTGATTTCGC CAAGAAAACG ATGTTCTTGA GTACCGGCGC GGAAGCGGTT GAAAACGCCA TCAAGATTGC CCGCGCCTAC ACCAAGCGCA CGGCCATCAT CGCGTTTACC AGTGGCTACC ACGGCCGCAC GCTGCTGACG CTGGGCTTGA CCGGCAAGGT GGCGCCGTAC AAGACCGGCT TTGGCCCGTT TCCGGCAGAA ATTTTTCATG CCCAGTTTCC CAACGCGCTG CACGGCGTGA GCGTCGATGA ATCGATCGCG TCGATTGAAT CGATCTTCAA GAACGATGTC GAAGCCAGCC GTGTCGCGGC CATCATTGTG GAGCCGGTGC AGGGCGAAGG CGGCTTCAAC GTGGCGCCGC CAGAGTTCCT GCAGCGCCTG CGCGCGCTGT GCGATCAGCA TGGCATTTTG TTGATTGCCG ACGAGATTCA AACCGGCGCT GGCCGCACCG GCACCTGGTT TGCCGTCGAG CAAAGCGACG TTGCGCCTGA CATGATCACG CTGGCCAAGT CCATGGCCGG TGGTTTTCCG ATCTCGGCCG TCGTGGGCCG CGCTGACGTG ATGGACGCGC CCGCGCCCGG CGGGCTGGGT GGCACGTATG CGGGAAGTCC CTTGTCGTGC GCCGCCGCGC TGGCGGTATT GGAGGTGTTC AAGCAGGAAA ACCTGCTGGA CCGCAGCCGC CAACTGGGCC TTCGCCTGAC CACCAGCCTG AAAAAAATGG CCGCCAGCCA CCGCTGCATC GCCGATGTGC GGGGCCTGGG TGCGATGGTG GCGATTGAGT TGTGCAAGGG GGGTGACATC CATCAGCCCG ATGCCGACAT GGCCAAACGG CTGGCAGCCG AGGCCACCCA GCGCGGGCTG ATCCTGTTGA CCTGCGGCAC ATATGGCAAT GTCGTTCGTA TTCTGGTGCC TCTGACGGCC AGTGATGCCA TCGTCGATGA AGGCCTGGCC ATCATCGACG CTTGCCTGAC CGCCATTCAA GCAGTCTAA
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Protein sequence | MQRESNLKNA SLMARRRAAV PRGVGQSHEV FIARGENAEI WDVEGKRYID FAGGIAVLNT GHCNPTVIAA VKAQLDLYTH TCFQVLAYEP YVELAERINA LAPGDFAKKT MFLSTGAEAV ENAIKIARAY TKRTAIIAFT SGYHGRTLLT LGLTGKVAPY KTGFGPFPAE IFHAQFPNAL HGVSVDESIA SIESIFKNDV EASRVAAIIV EPVQGEGGFN VAPPEFLQRL RALCDQHGIL LIADEIQTGA GRTGTWFAVE QSDVAPDMIT LAKSMAGGFP ISAVVGRADV MDAPAPGGLG GTYAGSPLSC AAALAVLEVF KQENLLDRSR QLGLRLTTSL KKMAASHRCI ADVRGLGAMV AIELCKGGDI HQPDADMAKR LAAEATQRGL ILLTCGTYGN VVRILVPLTA SDAIVDEGLA IIDACLTAIQ AV
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