Gene Rfer_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0592 
Symbol 
ID3960110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp617152 
End bp618450 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content62% 
IMG OID637915422 
Product4-aminobutyrate aminotransferase 
Protein accessionYP_521874 
Protein GI89899403 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0160] 4-aminobutyrate aminotransferase and related aminotransferases 
TIGRFAM ID[TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGCG AATCAAACCT GAAAAATGCA AGCTTGATGG CCCGTCGTCG GGCTGCCGTT 
CCACGCGGTG TTGGCCAAAG CCACGAGGTG TTTATCGCCC GCGGTGAAAA CGCCGAAATC
TGGGATGTGG AAGGTAAACG CTATATTGAC TTTGCCGGCG GCATTGCCGT TCTCAATACC
GGGCACTGCA ACCCGACGGT GATCGCCGCC GTCAAGGCCC AGTTGGACCT GTACACCCAC
ACCTGCTTCC AGGTTCTGGC CTATGAGCCC TATGTCGAGC TGGCCGAGCG CATCAACGCC
CTGGCCCCCG GTGATTTCGC CAAGAAAACG ATGTTCTTGA GTACCGGCGC GGAAGCGGTT
GAAAACGCCA TCAAGATTGC CCGCGCCTAC ACCAAGCGCA CGGCCATCAT CGCGTTTACC
AGTGGCTACC ACGGCCGCAC GCTGCTGACG CTGGGCTTGA CCGGCAAGGT GGCGCCGTAC
AAGACCGGCT TTGGCCCGTT TCCGGCAGAA ATTTTTCATG CCCAGTTTCC CAACGCGCTG
CACGGCGTGA GCGTCGATGA ATCGATCGCG TCGATTGAAT CGATCTTCAA GAACGATGTC
GAAGCCAGCC GTGTCGCGGC CATCATTGTG GAGCCGGTGC AGGGCGAAGG CGGCTTCAAC
GTGGCGCCGC CAGAGTTCCT GCAGCGCCTG CGCGCGCTGT GCGATCAGCA TGGCATTTTG
TTGATTGCCG ACGAGATTCA AACCGGCGCT GGCCGCACCG GCACCTGGTT TGCCGTCGAG
CAAAGCGACG TTGCGCCTGA CATGATCACG CTGGCCAAGT CCATGGCCGG TGGTTTTCCG
ATCTCGGCCG TCGTGGGCCG CGCTGACGTG ATGGACGCGC CCGCGCCCGG CGGGCTGGGT
GGCACGTATG CGGGAAGTCC CTTGTCGTGC GCCGCCGCGC TGGCGGTATT GGAGGTGTTC
AAGCAGGAAA ACCTGCTGGA CCGCAGCCGC CAACTGGGCC TTCGCCTGAC CACCAGCCTG
AAAAAAATGG CCGCCAGCCA CCGCTGCATC GCCGATGTGC GGGGCCTGGG TGCGATGGTG
GCGATTGAGT TGTGCAAGGG GGGTGACATC CATCAGCCCG ATGCCGACAT GGCCAAACGG
CTGGCAGCCG AGGCCACCCA GCGCGGGCTG ATCCTGTTGA CCTGCGGCAC ATATGGCAAT
GTCGTTCGTA TTCTGGTGCC TCTGACGGCC AGTGATGCCA TCGTCGATGA AGGCCTGGCC
ATCATCGACG CTTGCCTGAC CGCCATTCAA GCAGTCTAA
 
Protein sequence
MQRESNLKNA SLMARRRAAV PRGVGQSHEV FIARGENAEI WDVEGKRYID FAGGIAVLNT 
GHCNPTVIAA VKAQLDLYTH TCFQVLAYEP YVELAERINA LAPGDFAKKT MFLSTGAEAV
ENAIKIARAY TKRTAIIAFT SGYHGRTLLT LGLTGKVAPY KTGFGPFPAE IFHAQFPNAL
HGVSVDESIA SIESIFKNDV EASRVAAIIV EPVQGEGGFN VAPPEFLQRL RALCDQHGIL
LIADEIQTGA GRTGTWFAVE QSDVAPDMIT LAKSMAGGFP ISAVVGRADV MDAPAPGGLG
GTYAGSPLSC AAALAVLEVF KQENLLDRSR QLGLRLTTSL KKMAASHRCI ADVRGLGAMV
AIELCKGGDI HQPDADMAKR LAAEATQRGL ILLTCGTYGN VVRILVPLTA SDAIVDEGLA
IIDACLTAIQ AV