| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0588 |
|---|
| Symbol | |
|---|
| ID | 3960106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 610522 |
|---|
| End bp | 611733 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637915418 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_521870 |
|---|
| Protein GI | 89899399 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTGCG GTATATTGCC CCGCAGCATC CAACAGCAAC GGCACGAGAC AAACAGCACG
ATGAACGTTA CGCACAATCA AGGTGGTCCC GCAACTCGCG GCATTCTGGT TCGGGGCCGT
GAAACAGGCG ACGCGAGCGG GGCACGTCAT GCCGTGCTGA CGCTGCTTGA CGCGCTGGAT
CTGGCGCCCC ATGTGAGGGT TGAAGCCGGG GCCGATGCCC TGGGACCCTT TGTGCGGCTG
TGGCTCAGCG ACGACCGAGT GCAGGCCTGG GCTCCCGCTC ACGACACTTT GCAGCTCTGC
CAGACGCTGG CACTCGACAC CCTGAACCAG CCCGGCGACC TGATGCGCGA GATCGTGCTG
ACCCTGCTCA TGGGGCCGGT GGCCTTCGAG TTCCCCAGCC TGGATGAACT GGTGTCGGCG
GTTCGCATCC GGCGCAACAT CGTGCAAGCC GCACGCAAGA CGACGCTGGC CTTTCACACC
CGTGCGCTGG ATCGCCCGCT GGACTGCTGG ACCTATGACG AGGATCGCGG TTTCACCATC
CGGCCCGGGG TGTCGCTGAT CGCTGCCCTG ACCAAAGCCA CCCAGCCGGA AGTCTCGGGC
AGCCTGTATT CGTTCTCCTG CTATCGCGCC ACCGAATACG TGATCCTGTT GGGCATTGCG
CAGGAGCTGC AGCAGAGCAA CCCGGCTCTG CTGCAGCAGT TGCAGACGAT GTGGACGGCC
CGGCCGATCG CGTCGGGCGA GTTTCATGAG GTCTTTCTGC GTGAACAGGG CTCTATGGAG
GAGCCCTTGC CGCCGCGTTA TTTCGTGCCG GGTGACCGCA CCTGGTTTCG TAACCCCGAT
GAAGCCTCCG CCGATGCCTC GGGTTTTGAA GGTTCGTGGG TCATGTACCT GGGCGGCGGC
CTGTTCTGCA ATTTCTGGAA GCTCGATCAG CCCTACACCC TGACCCGCAA ATGCGTGGAG
ATCTACCACT GGCGACACGG ACTCTATCGG GACGACAACG GCGACGAGCG CATTGACGAA
GTCCGGATCG AGCCTTTGAT CGAAGCCTCA TTGAACGACC CCGCCGAGCG CCAGCGCATC
CTGGCCGTGA TGGAGCGCTA CCGGGAGCCG CGCGGCGTCT ACACCGAAGC CGGCGGCTGC
ATCGACACCA CGCGTGAATT CGCGCGCTGG GTTCGCCCCG GCACGGCCGA CCTGGTGTTG
CCAGCGCAAT GA
|
|---|
| Protein sequence | MACGILPRSI QQQRHETNST MNVTHNQGGP ATRGILVRGR ETGDASGARH AVLTLLDALD
LAPHVRVEAG ADALGPFVRL WLSDDRVQAW APAHDTLQLC QTLALDTLNQ PGDLMREIVL
TLLMGPVAFE FPSLDELVSA VRIRRNIVQA ARKTTLAFHT RALDRPLDCW TYDEDRGFTI
RPGVSLIAAL TKATQPEVSG SLYSFSCYRA TEYVILLGIA QELQQSNPAL LQQLQTMWTA
RPIASGEFHE VFLREQGSME EPLPPRYFVP GDRTWFRNPD EASADASGFE GSWVMYLGGG
LFCNFWKLDQ PYTLTRKCVE IYHWRHGLYR DDNGDERIDE VRIEPLIEAS LNDPAERQRI
LAVMERYREP RGVYTEAGGC IDTTREFARW VRPGTADLVL PAQ
|
|---|
| |