Gene Rfer_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0587 
Symbol 
ID3960105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp609590 
End bp610453 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID637915417 
Productethanolamine ammonia-lyase small subunit 
Protein accessionYP_521869 
Protein GI89899398 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4302] Ethanolamine ammonia-lyase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATC CGACCTCTCC CGTTATCGCC AACCCGTGGG CCGCCCTGCG CCAATTTACC 
GATGCCCGCA TTGCGCTGGG GCGCGCCGGC GTGAGCTTGC CGACGGCCGC GCATCTGGAC
TTCCAGCTGG CGCATGCCAA GGCGCGCGAC GCCGTCCATC TGGCGCTGGA TGCGCCGCAA
TTGGCGCAGT CACTTAATGC CGCGCGCGGC GATCAACAGG CCCCCTGCCT CCTGCTGCAT
AGCGCGGCTG CCGACCGCCC CACTTACCTG CAGCGCCCTG ACCTGGGGCG CCGGCTCGAC
GCCGCATCGA GCGCTGCAGT GGATGCCCTG GAACCGGCAC AAGCGCCATC GCCACGCCCG
TACGACCTCG CGTTCGTGGT GGTGGACGGC CTGTCGGCAT TGGCCATCGA GCAGAACGCC
GCGCCTTTTC TGCGTATCCT GCAGGCCCGG ATCGCGCCCG AGCACTGGTC GGTCGCCCCG
ATCTGCATCG TCAAGCAGGG CAGGGTGGCG ATTGGCGACG AGGTGGCCGA GCGGCTGGGC
GCAAAGGCGG TGGTGGTGTT GATCGGCGAA CGCCCCGGTT TAAGTGCAGC CGACAGCATG
GGCCTGTACC TGACCTGGAT GCCGCGCGTC GGGCTGCTTG ACGCCAGCCG CAATTGCATC
TCCAACGTGC GCCCGGCTGG TCTGGGCTTT GATGAAGCCG CTTACAAGCT GCACTATCTG
TTGTCACAAG CGCGCCAGCG GCAATTGTCC GGTGTCGAAC TCAAGGACGA AACGGGTGGC
GGCCCCGACC GGGTGACTGC GAATCAGACA AACTTCCTGC TGGACCACGC GCACACGCCA
AACGAGGCGG CCCCACCGTC TTGA
 
Protein sequence
MDDPTSPVIA NPWAALRQFT DARIALGRAG VSLPTAAHLD FQLAHAKARD AVHLALDAPQ 
LAQSLNAARG DQQAPCLLLH SAAADRPTYL QRPDLGRRLD AASSAAVDAL EPAQAPSPRP
YDLAFVVVDG LSALAIEQNA APFLRILQAR IAPEHWSVAP ICIVKQGRVA IGDEVAERLG
AKAVVVLIGE RPGLSAADSM GLYLTWMPRV GLLDASRNCI SNVRPAGLGF DEAAYKLHYL
LSQARQRQLS GVELKDETGG GPDRVTANQT NFLLDHAHTP NEAAPPS