| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0570 |
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| Symbol | |
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| ID | 3960719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 591776 |
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| End bp | 592480 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637915400 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_521852 |
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| Protein GI | 89899381 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.930718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGT TCGCATCTGG GACGGCCGCT TTGCCGCTTC GCGCTTCGGG CGTGGTTGTT
GCGCCCACGG TATTGGCGGG TGGGGCTTTG TCGCGCGTTG ATCAGTTGAA GGCGCAAATC
CGCAACCCTG GCGAAGCTTC TTTTTTTTAC CGTGACCATC ATTTTCAATA TGACGCGGTC
AAGGTGCTGC CGGGCGAGTA CTTTGTGTCC GCCGAAGATC TGGTCATCAT GACCGTCTTG
GGCTCGTGCA TTTCGGCCTG CATCTGGGAT GGCAGGGTCC GGGCCGGGGG CATGAACCAT
TTTATGCTGC CCGATGGCGA CAGCGTTGAT GGTTTTGGTC GCTATGGTTC GTATGCCATG
GAGTTGCTGA TCAACGAATT GCTGAAAAAG GGCGCACGGC GCGAGTCGAT GCAGGCCAAG
GTGTTTGGCG GCGCGGCGGT CATGGCGGGT TTTACCACCA TGAACGTGGG TGAACGCAAC
ACCAAATTTG TCTTGGACTA CTTGGCGACG GAGCGAATCC CGGTGGTGTC GCAGGATGTG
CTGGATATTC ACCCGCGCAA GGTTTGTTTT TTCCCGGTGA CCGGCAAGGT GCTGGTCAAG
CGGCTGGCCC ATTCGCATCC GGAAACGCTG GCCGTGGAAG AGCGCAAAGG CAATGCCGCG
ACCGTAGCCA AAGCGACGTC TGGTGGCTCG GTGGATTTGT TTTGA
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| Protein sequence | MNMFASGTAA LPLRASGVVV APTVLAGGAL SRVDQLKAQI RNPGEASFFY RDHHFQYDAV
KVLPGEYFVS AEDLVIMTVL GSCISACIWD GRVRAGGMNH FMLPDGDSVD GFGRYGSYAM
ELLINELLKK GARRESMQAK VFGGAAVMAG FTTMNVGERN TKFVLDYLAT ERIPVVSQDV
LDIHPRKVCF FPVTGKVLVK RLAHSHPETL AVEERKGNAA TVAKATSGGS VDLF
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