Gene Rfer_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0564 
Symbol 
ID3960713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp585881 
End bp587032 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content59% 
IMG OID637915394 
Productputative signal transduction histidine kinase 
Protein accessionYP_521846 
Protein GI89899375 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACCCC ACTGCTGCAC TGATGCTGGT CACCTTCATT TACGGGCATC GCCGACAATG 
ATACCGTTCA CCATGGCGCA AACACATCCT CATCCCCGTC CGCTACGAAT TTTGCACTTG
GAAGATTCCG CCCTTGACCA TGAACTCGTC AAACGGGCGT TACTCAAGTC GCACCAGCCC
TGCGAGCTTG AGCGGGTAGA AACCCTTAAC GAGTTTGGAC GGCGGGTCAA AGAGTTCGAA
TTTGATGTCA TTCTGGCGGA CTATCGACTG CCCGGCTTTA CGGCACTGGA CGCCTGGCAT
ATCCTGCAAC AACAGACACG ACAACCGCCC TTCGTCTTGC TGTCCGGTGC CATTGGCGAG
CCGGCCGCCG TTGCGGCCAT CAAAACGGGC ATCAGCGACT ACCTGGCCAA AGACGACCTG
GGCCGACTGG CGCAGGTCAT CCGCCGCGCG CTTGAGGTCC ACGACATTCG ACGGGCCAAA
GAAATGGCCG ACAGCGAGTT GGCCAGGTCC GAGAAAAGGC TGGCGGATTT CGCCGAGCAT
TTACAGATGA CCATAGAACA AGAGCGTGCT GCAATTGCCC GCGAAATTCA TGATGACATT
GGCGGCGCGC TGGCCGCCGT CCGCTTTGAT CTTTCCTGGA TCGGCCGACA CACAGCCGAC
CCCGTGACCC AGCAGCACAT CACAGCGGCC ACCGAGATGC TGCAGCAGGC GATTGGGGCA
AGTCAGCGCA TCATGATGAA TTTGCGTCCC GCCATTCTGG ATCAAGGTCT GGTCGCTGCC
GTTCAATGGC TTGCCGGAGG TTTTGCAAAG CGCACGGGCA TAAAAACTAC CGTGCATGCG
GCACCAGAAG CGGGCACGCT GTCCAAGGCC GTGCAGTTGG TGGCCTACCG CACGGCACAG
GAAGCCCTGA CCAATATTGC CAAACACGCG GACTGCAGCC AGGTCACCAT CGACTTGTCC
GATGCAGAGA ACGTCTTGAC GCTTGAAATC AAGGATAACG GCAAAGGCAT CTCGCCCATC
GAGCTTAGCA AGCCGCAAGC GTTTGGCGTC CGGGGTCTCC ACGAACGAGC CAAGACCGTG
GGCGGCTGGC TAGACGTCAG CACCCACCTG GGCAGCGGAA CTTCAATCAT TCTGTCCGTG
CCCTTGGCGT AA
 
Protein sequence
MRPHCCTDAG HLHLRASPTM IPFTMAQTHP HPRPLRILHL EDSALDHELV KRALLKSHQP 
CELERVETLN EFGRRVKEFE FDVILADYRL PGFTALDAWH ILQQQTRQPP FVLLSGAIGE
PAAVAAIKTG ISDYLAKDDL GRLAQVIRRA LEVHDIRRAK EMADSELARS EKRLADFAEH
LQMTIEQERA AIAREIHDDI GGALAAVRFD LSWIGRHTAD PVTQQHITAA TEMLQQAIGA
SQRIMMNLRP AILDQGLVAA VQWLAGGFAK RTGIKTTVHA APEAGTLSKA VQLVAYRTAQ
EALTNIAKHA DCSQVTIDLS DAENVLTLEI KDNGKGISPI ELSKPQAFGV RGLHERAKTV
GGWLDVSTHL GSGTSIILSV PLA