Gene Rfer_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0560 
SymbolfliP 
ID3960748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp583326 
End bp584108 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content57% 
IMG OID637915390 
Productflagellar biosynthesis protein FliP 
Protein accessionYP_521842 
Protein GI89899371 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1338] Flagellar biosynthesis pathway, component FliP 
TIGRFAM ID[TIGR01103] flagellar biosynthetic protein FliP 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.39215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGAGCG ATCAATTTGT TTATTCGGCG CTTGGCAAGG GACCGCTGTC CAAGGTGGCG 
GTGGTGTTGC TGGCGATCCT GACGCAGTCG GCGGCACTGG CCCAGAGCGC AGGGCAGTTG
CCTTTGCTGA TGGGGTCGGG GCCCTCGGGA GTGAGTTTTT CGGTGCCGAT CCAGACACTG
CTGTTTTTTA CTGCCCTGTC CTTTTTGCCG GCCGTCTTGC TCATGATGAC GGGCTTCACG
CGCATTGTGA TCGTGTTGTC ACTGATGCGC CAAGCCTTGG GTACACAGTC GGCGCCACCG
AATCAGGTGA TTGTCGGGTT GTCGCTTTTC CTGACATTTC TGGTGATGGG GCCAACGCTG
GACAAGGTCT ACAGCGAGGC TTATCTGCCC TATACCAATA GCGGGATGCC ATTTGAGCAG
GCGCTGGCCA AAGCGGAGGA CCCGTTGCGC CAGTTTATGA GCAAACAAAC GCGGCAGTCG
GATCTGGCGC TGTTTGCCAA GCTGGCCAAA TTGGAACCGG GCGCAACAGC CCAGACCGTG
CCGATGCGGG TGCTGGTGCC GGCGTTCGTC ACGAGCGAGC TTAAATCGGC GTTCCAGATT
GGGTTCATGA TCTTTATTCC TTTTCTGGTG ATCGACATTG TGGTCGCCAG TGTGCTGATG
TCGCTGGGGA TGATGATGTT GTCGCCGGTG TTGGTGGCCT TGCCGTTCAA ACTGATGTTG
TTTGTGCTGG CCGATGGCTG GAATCTGCTG ATTGGCTCTT TGGCCGCCAG TTTTGTGACC
TGA
 
Protein sequence
MVSDQFVYSA LGKGPLSKVA VVLLAILTQS AALAQSAGQL PLLMGSGPSG VSFSVPIQTL 
LFFTALSFLP AVLLMMTGFT RIVIVLSLMR QALGTQSAPP NQVIVGLSLF LTFLVMGPTL
DKVYSEAYLP YTNSGMPFEQ ALAKAEDPLR QFMSKQTRQS DLALFAKLAK LEPGATAQTV
PMRVLVPAFV TSELKSAFQI GFMIFIPFLV IDIVVASVLM SLGMMMLSPV LVALPFKLML
FVLADGWNLL IGSLAASFVT