Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0536 |
Symbol | |
ID | 3963875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 559596 |
End bp | 559976 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637915366 |
Product | general secretion pathway protein I |
Protein accession | YP_521818 |
Protein GI | 89899347 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01707] general secretion pathway protein I [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAGCG CTCGCCAGCC GCAGCGCCAC GGTGCGCGCG GCTTTACCCT GGTTGAAGTG CTGGTGGCGC TTGGTATTGT GGCCATTGCC CTGCTGGCTG GCTTGCAGGC CACCGCCGCC TTGACCCGCA ACGCCCAGCG CCAGTCCGAC GTCTTGCTGG CCCAGACCTG TGCCGAGAAT GAGCTGGTCA AGGTGCGCCT GGCCAGGCAA TTGCCCGACG TCGGCGACAG CAGCATCGCC TGCGAGCAGG CTGGGGAGGT CTTCACGGTG GCGCTGGCGG TGCGGCCCAC GCCCAACTTC AATTTCCGAC GGGTCGATGC GCAGGTGTTC AAGGGCGACG ACGCCGTGCT GCGCTTGTCC ACCGTGGCGG GGCGCTACTG A
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Protein sequence | MNSARQPQRH GARGFTLVEV LVALGIVAIA LLAGLQATAA LTRNAQRQSD VLLAQTCAEN ELVKVRLARQ LPDVGDSSIA CEQAGEVFTV ALAVRPTPNF NFRRVDAQVF KGDDAVLRLS TVAGRY
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