Gene Rfer_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0536 
Symbol 
ID3963875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp559596 
End bp559976 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content68% 
IMG OID637915366 
Productgeneral secretion pathway protein I 
Protein accessionYP_521818 
Protein GI89899347 
COG category 
COG ID 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAGCG CTCGCCAGCC GCAGCGCCAC GGTGCGCGCG GCTTTACCCT GGTTGAAGTG 
CTGGTGGCGC TTGGTATTGT GGCCATTGCC CTGCTGGCTG GCTTGCAGGC CACCGCCGCC
TTGACCCGCA ACGCCCAGCG CCAGTCCGAC GTCTTGCTGG CCCAGACCTG TGCCGAGAAT
GAGCTGGTCA AGGTGCGCCT GGCCAGGCAA TTGCCCGACG TCGGCGACAG CAGCATCGCC
TGCGAGCAGG CTGGGGAGGT CTTCACGGTG GCGCTGGCGG TGCGGCCCAC GCCCAACTTC
AATTTCCGAC GGGTCGATGC GCAGGTGTTC AAGGGCGACG ACGCCGTGCT GCGCTTGTCC
ACCGTGGCGG GGCGCTACTG A
 
Protein sequence
MNSARQPQRH GARGFTLVEV LVALGIVAIA LLAGLQATAA LTRNAQRQSD VLLAQTCAEN 
ELVKVRLARQ LPDVGDSSIA CEQAGEVFTV ALAVRPTPNF NFRRVDAQVF KGDDAVLRLS
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