Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0534 |
Symbol | |
ID | 3963873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 558642 |
End bp | 559085 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637915364 |
Product | general secretion pathway protein G |
Protein accession | YP_521816 |
Protein GI | 89899345 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01710] general secretion pathway protein G [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAA TTTCTCAAAG CATGCGTCGT CGCCTCCAGG CCGGCTTCAC CCTGATCGAG CTGATGGTGG TGTTGCTGAT CATCGGGGTG CTGGCCGCCC TGATCGTGCC GAACGTGCTG GACCGCGCTG ATGACGCGCG GGTCACGGCG GCCAAGACAG ACGTCAATAA CCTGATGCAG GCCCTCAAGC TCTACCGGCT GGACAACCAG CGCTACCCCA CGGCCGAGCA GGGTTTGCAA GCCTTGCTGA CCAAACCCAC GACCGCGCCG GTGCCTCCCA ACTGGAAGTC CTACCTTGAC CTGCTGCCCA ATGATCCCTG GGGCAAGCCC TATGTTTACC TCAACCCCGG CATCAAGGGC GAGGTCGATG TGATGTCCCT TGGTGCCGAT GGCCAGGCCG GGGGCGAGGG TAAAAATGCT GATATTGGCA GCTGGCAACC ATAG
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Protein sequence | MKSISQSMRR RLQAGFTLIE LMVVLLIIGV LAALIVPNVL DRADDARVTA AKTDVNNLMQ ALKLYRLDNQ RYPTAEQGLQ ALLTKPTTAP VPPNWKSYLD LLPNDPWGKP YVYLNPGIKG EVDVMSLGAD GQAGGEGKNA DIGSWQP
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