| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0532 |
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| Symbol | |
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| ID | 3963871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 557358 |
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| End bp | 558074 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637915362 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_521814 |
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| Protein GI | 89899343 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAA AGGCAACTAT TTATACTTCA CCCATGACTT ACCGCATTGC CCCTTCCATT
CTCTCCGCCG ACTTTGCCCG CCTGGGTGAG GAACTCAGCC ACGTCATTGC CGCCGGTTGC
GACTGGATTC ACTTTGACGT GATGGACAAC CACTACGTGC CCAATCTCAC CTTCGGCCCG
ATGATCTGCG GTGCTTTGAA GCCGCATGCC AAGACCGCTG GCGGCGTGGC CGTGCCGATT
GATGTGCACC TGATGGTGCA ACCGGTCGAT GCGTTGGCCA GTGCCTTTGC CGATGCGGGG
GCGGATTTGA TCAGTTTTCA CCCGGATGCA TCCGGCCATG TGCATCGCAG CATCCAGGCC
ATCAAGGCCA AGGGATGCAA GGCCGGCCTG GTGTTCAACC CGGCTGAACC CCTTGACGTG
CTGGACTGGG TCATTGACGA CATTGATCTG ATCCTGATCA TGAGCGTCAA CCCCGGCTTT
GGCGGCCAGA GTTTTATTGA TTCAGCCTTG CGCAAGATCG AGGATGTGCG TCGGCGCATC
ACGGCCTGCG GCAAAGACAT TCGGCTGGAA GTCGATGGTG GCGTCAAGGT GGACAACATC
CGGCGCGTCG CCGACGCCGG GGCCGACACT TTTGTGGCCG GCAGCGCCAT TTTTGGCCAA
CCGGATTACA AGTCAGTGGT GGATGCCATG CGGCTGGCGC TGGGAACAGC CGCCTGA
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| Protein sequence | MNSKATIYTS PMTYRIAPSI LSADFARLGE ELSHVIAAGC DWIHFDVMDN HYVPNLTFGP
MICGALKPHA KTAGGVAVPI DVHLMVQPVD ALASAFADAG ADLISFHPDA SGHVHRSIQA
IKAKGCKAGL VFNPAEPLDV LDWVIDDIDL ILIMSVNPGF GGQSFIDSAL RKIEDVRRRI
TACGKDIRLE VDGGVKVDNI RRVADAGADT FVAGSAIFGQ PDYKSVVDAM RLALGTAA
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