| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0528 |
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| Symbol | |
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| ID | 3963867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 552646 |
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| End bp | 553662 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637915358 |
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| Product | porin |
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| Protein accession | YP_521810 |
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| Protein GI | 89899339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000423032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CCCTAATCGC CTTGGCAGTG CTCGCTGCTT CCGGCGCCGC TATGGCCCAG
TCTTCCGTCA CGCTGTACGG TGTTGCAGAC GTCGGTTTTG CCCATGAAGA CAACGGTAGC
ACCAGCGTCA ACCGTATGGA TTCTGGCAAT TTGAACGGCA GTCGTTGGGG CCTGAAAGGC
TCTGAAGATC TGGGCGGCGG CTTGAAAGCG ATTTTCACCC TCGAAGCCGG TTTTAGCCTT
GACACAGGCG CACAGGCAGA TGCAGCAAGT TTCTTTAACC GCCAATCTTT TGTTGGTGTG
TCTAGCAACT TTGGTACCGT CAAGCTTGGT CGTCAAATGA ACCCCGTCTA TGCCACCGCA
TCCACCTGGG ATTCGTTTGG TGACGCACTG GCCGGTGACT CCTCGCATTT GTTTAGCTAC
AACGGCAGCC GCACCAACAA CATGATCTCC TACAACTACA GTGCCAATGG CTTCTACGGC
GAGTTGCAGT ATGGTCTGGG TGAAGTTGCA GGTAACAACT CGATTACCGG TGACAACTCT
GCTGGTCGCA GTGCTGCCAT GTTTGTGGGC TACATGAGAG GCCCCTTCGA TGTCGTGCTG
ACGCATCAAA ATATCCATAA CAGCGGCCCT TACACGACTG CCACCAAAAT GACATTGCTG
GGCGGCAATT ATGATTTCGG CGTGGTTAAG CTGTTTGCGG CCTATGCAGT TGAAAAGACC
CTGGGTGTTG GCGCCAAGGA CCAAAAAGAC GCTCACCTCG GTCTGACGGC ACCCGTTGGC
ACCGCTGGCA CGGTCGAACT GTCCTATCTC CGCAAGAAGG ATGATCTGGT CTCCAATGCC
AATGCCCATC AAGTGGCCGT TGGCTACGTT CACACGCTGT CCAAGCGCAC TGCGTTGTAC
ACCAGCTACG CTCAGATGAG CAACGAGAGT GCAGCGGCTT ATAGCGCTGG CAAGCTCGTT
GTCCCCGCTG GCAATAGCGA CAAGGTGTTC GACATTGGCG TGCGCCACTC GTTCTAA
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| Protein sequence | MKKSLIALAV LAASGAAMAQ SSVTLYGVAD VGFAHEDNGS TSVNRMDSGN LNGSRWGLKG
SEDLGGGLKA IFTLEAGFSL DTGAQADAAS FFNRQSFVGV SSNFGTVKLG RQMNPVYATA
STWDSFGDAL AGDSSHLFSY NGSRTNNMIS YNYSANGFYG ELQYGLGEVA GNNSITGDNS
AGRSAAMFVG YMRGPFDVVL THQNIHNSGP YTTATKMTLL GGNYDFGVVK LFAAYAVEKT
LGVGAKDQKD AHLGLTAPVG TAGTVELSYL RKKDDLVSNA NAHQVAVGYV HTLSKRTALY
TSYAQMSNES AAAYSAGKLV VPAGNSDKVF DIGVRHSF
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