| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0511 |
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| Symbol | |
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| ID | 3963811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 529864 |
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| End bp | 532311 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915342 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_521794 |
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| Protein GI | 89899323 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCA CCGCTATTTT TCAATTTGAC AAACCCACCA ACAGCGTCGA AGCGCTGCGC
CGGTCAATCT CGAACAGGCT GGTTTACCAG GTCGGCAAAG ACCTGCACTC CGCCACCCAG
CGCGACTGGC TGTTTGCCGT GTTTCATGCC GTGCGCGACC GCATCATGGA CGGCTGGCGC
GAGTCGTTGA CCCAGGCCGA AGACCAGGAT GCCAAGCGCG TGTATTACCT GTCGCTGGAA
TTTCTCACCG GACGGGCACT GACCAATGCG ATGTTGGCGA CTGACATTTA TGAACCCGTC
AAACAGGCCT GCGCCCTGCT GGGTGCCGAC TTTGATGCCC TGATTGACCT GGAGCCCGAT
GCCGGCCTGG GCAACGGCGG TCTGGGTCGC CTGGCAGCCT GCTTTCTGGA CTCGATGGCC
ACCTTGGGCC TGCCCGGCAT GGGTTATGGC ATCCGCTACG AATTCGGCAT GTTTGCCCAG
CGTATCGAAC ATGGACAGCA AGTGGAAGAG CCCGACTACT GGCTGGTCAA CGGCTATCCG
TGGGAGTTCA TGCGCCCCGA ACTCAGCTAC ACCATCCGTT ATGGCGGACG CCTGGTACCG
CAGAACGGCC AATCGCTCTG GCTCGATACC GAAGATGTGA TTGCCACCGC CTACGACAGC
GGCGTGCCTG GCCATCAGAT GCGCAGCGTG GTCACCATGC GGCTCTGGTC GGCACGTGCC
AGCGGCGGCG TCAACCTGGA CGCCTTTAAC CGGGGCGATT ACATCCAGGC AGTGGAGGCC
AAAAACCAAT CAGAAAACGT CTCGCGGGTA CTCTACCCGG ATGATCGCAC CGAGCACGGG
CATGAATTGC GCCTGCGCCA GGAGTACTTT TTTGTCAGTG CCTCGCTGCA GGATATTTTG
CGGCGTCACC TCAAAAACCA CAGCGGCTTT GAACAACTTG CCGACAAGGT GGCTATTCAC
CTCAACGACA CCCATCCGGC GCTGGCGGTG CCCGAGTTGA TGCGACTCCT GATGGACGAG
CACCAACTTG ACTGGGAAGC CGCCTGGGGC CTGTGCACGC GCATCTTCTC GTACACCAAT
CACACCCTGA TGGAAGAGGC CCTGGAGACC TGGCCGGTGG AACTGCTGGG CCGCGTGTTG
CCCCGGCACA TGGGTCTGAT CTTCGACATC AATGCCCGTT TTCTGGCTGA AGTTCATACC
CGATTCCCGG ATGACCATGC CTTGTTGCGG CGTATTTCAC TGATCGAAGA GCGCGGCGTG
CGCCGGGTGC GCATGGCCCA TCTGTCGGTG TTGTCCAGTC ACAAGGTCAA TGGTGTCTCG
GCCCTGCACA GTCAATTGAT GGTGGACACG ATCTTTTCCG ATTTTGTGCG GATGTATCCG
GAGCGCTTCT GCAATAAAAC CAACGGCATT ACCCCGCGCC GCTGGCTGTC GCTGGCCAAC
CCTTCGCTAT CGACCTTGAT CGACAGCCGC ATCGGCCCCG ACTGGCGGCA AGATCTGGAT
CAGTTGGCCC AGTTGCGCGA TCTGGCCGAC GAGCCGGAGT TTCAAAATGC CTTCCGGCTG
GCCAAGCAGC AAAACAAGCG CCGTCTGACG GACCTGATGG CGCGCTGCCC GGGCGTCATC
GTGGATCCGC ACAGTCTGTT CGACGTCCAG GTCAAGCGCA TGCACGAATA CAAGCGCCAA
CTGCTCAATG TGCTGCATGT CATCACGCGC TACCACCGCA TACTGGCCCA ACCGCATGCC
AACTGGGTGC CACGCACCGT GATCTTTGCC GGCAAGGCCG CCTCCGCCTA CTACATGGCC
AAACTCGTCA TCCGGCTGAT CAACGACGTG GCGCGCGTGA TCAACAACGA CCCCCTGATC
GGTTCGCTGC TGCGCGTTGT GTTCATCCCC AATTACCGGG TGTCGCTGGC AGAAATCATC
ATTCCAGCGG CCAATTTGTC GGAGCAGATT TCAACCGCCG GCACCGAAGC TTCAGGCACC
GGCAACATGA AATTCGCCCT CAATGGCGCT CTCACGATTG GCACCTGGGA TGGTGCCAAC
ATTGAAATTG CCGAGAAGGT AGGCCCGGAC AATATTTTCG TGTTTGGCAA CCGCGCCGAA
AAAGTGGCTG AGCTGCGGGG TTACGGCTAT CTGCCGCGCA GCTACTACGA GGGCAATTTT
GATCTGAAGT TTGCCATTGA CCGCCTGGCT CAAGGTGGGT TTTCGCCCGA GGAGCCCGGT
CGCTACCGCG ATGTGGTCAA TGTGCTGCTG GAGTCTGACT ACTACCAGTT GTTGGCCGAT
TACGGCGACT ATTGTGCCTG CCAGGACAAG GTGGACGATC TCTATCGGCG CCCCGGCGCA
TGGACGCGCA GCGCGATTCT GAATGTTGCC GGCATGGGAC CTTTTTCTTC CGACCGCACG
ATTCGCGAAT ATGCCACCGA TATCTGGGGC GTGGCGCCCC TGCGGTGA
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| Protein sequence | MPATAIFQFD KPTNSVEALR RSISNRLVYQ VGKDLHSATQ RDWLFAVFHA VRDRIMDGWR
ESLTQAEDQD AKRVYYLSLE FLTGRALTNA MLATDIYEPV KQACALLGAD FDALIDLEPD
AGLGNGGLGR LAACFLDSMA TLGLPGMGYG IRYEFGMFAQ RIEHGQQVEE PDYWLVNGYP
WEFMRPELSY TIRYGGRLVP QNGQSLWLDT EDVIATAYDS GVPGHQMRSV VTMRLWSARA
SGGVNLDAFN RGDYIQAVEA KNQSENVSRV LYPDDRTEHG HELRLRQEYF FVSASLQDIL
RRHLKNHSGF EQLADKVAIH LNDTHPALAV PELMRLLMDE HQLDWEAAWG LCTRIFSYTN
HTLMEEALET WPVELLGRVL PRHMGLIFDI NARFLAEVHT RFPDDHALLR RISLIEERGV
RRVRMAHLSV LSSHKVNGVS ALHSQLMVDT IFSDFVRMYP ERFCNKTNGI TPRRWLSLAN
PSLSTLIDSR IGPDWRQDLD QLAQLRDLAD EPEFQNAFRL AKQQNKRRLT DLMARCPGVI
VDPHSLFDVQ VKRMHEYKRQ LLNVLHVITR YHRILAQPHA NWVPRTVIFA GKAASAYYMA
KLVIRLINDV ARVINNDPLI GSLLRVVFIP NYRVSLAEII IPAANLSEQI STAGTEASGT
GNMKFALNGA LTIGTWDGAN IEIAEKVGPD NIFVFGNRAE KVAELRGYGY LPRSYYEGNF
DLKFAIDRLA QGGFSPEEPG RYRDVVNVLL ESDYYQLLAD YGDYCACQDK VDDLYRRPGA
WTRSAILNVA GMGPFSSDRT IREYATDIWG VAPLR
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