Gene Rfer_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0500 
Symbol 
ID3964091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp518783 
End bp520147 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content65% 
IMG OID637915331 
ProductDNA repair protein RadA 
Protein accessionYP_521783 
Protein GI89899312 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1066] Predicted ATP-dependent serine protease 
TIGRFAM ID[TIGR00416] DNA repair protein RadA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.81715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAG AAAAAACCGT TTACGTTTGC TCCGATTGTG GCGGCACCAG CCCCAAATGG 
CAGGGCAAAT GCCCCAGTTG CAACGCCTGG AATACGCTGA TTGAATCGGT GCCAGAGAGC
TTGTCCCCCA CCAAAAACCG TTTCGCCTCC CTGGCCAAGA CGGCAGAAAT CGCCATTCTG
GGCGACATTG ACGCGGTGGA CATGGCGCGC ACCCCCACCG GCCACGAGGA GCTTGACCGT
GTGCTGGGCG GCGGCATGGT CGAAGGCGGC GTGGTACTGA TCGGCGGCGA CCCCGGCATT
GGCAAGTCCA CCCTGCTGCT GCAGGCGCTC GACTCGCTGC AATGCAGCGG CCAGAACACC
TTGTACGTGA CGGGCGAAGA AAGCGGCGCG CAAGTCGCGC TGCGCTCGCG CCGCCTCGGG
CTGGGCCACT CGCAGGTGCG GGTGCTGGCC GAGATCCAGC TGGAAAAAAT CCTGTCCGTT
TTGGCGGCCA CCCAGCCTGA CATCGCCGTC ATCGACTCGA TCCAGACGGT CTACTCGGAT
CAGCTCACGT CGGCCCCCGG TTCGGTGGCG CAAGTGCGCG AATGCGCAGC GCACCTGACG
CGTGCGGCCA AGGCCAGCGG TGTCTGCATC GTGCTGGTCG GTCATGTCAC CAAGGAAGGC
GCCCTGGCGG GCCCGCGTGT GCTGGAGCAC ATGGTGGACA CGGTGCTCTA CTTTGAAGGC
GACACGCATT CAAGTTTCAG GCTGGTGCGC GCCATCAAGA ACCGCTTTGG CGCGGTGAAC
GAAATTGGCG TCTTTGCCAT GACCGAAAAG GGTCTCAAAG GGGTGAGCAA CCCGAGCGCC
ATTTTCCTGA GCCAGCACGC CGAGCCGGTG CCCGGCAGTT GCGTGATGGT GACGCTGGAG
GGCACACGGC CGATGCTGGT GGAAATTCAA GCGCTGGTCG ACAGCGGTGG GCCCTCGCCC
CGGCGTTTGA GCGTGGGCCT GGACAAAGAC CGCCTCGCCA TGCTGCTGGC CGTGCTGCAC
CGCCACGCGG GCGTGGCTTG CATGGACCAG GACGTGTTTG TGAACGCGGT CGGCGGTGTG
CGCATCAGCG AGCCCGCTGC CGATCTGGCG GTGCTGCTGG CGATCACGTC GAGCCTGCGC
GGCAAGCCGC TGCCGAAGGG ATTCTTTGCC TTTGGCGAGG TTGGCCTGGC CGGTGAAGTG
CGGCCCGCGC CGCGCGGTCA GGAACGGCTG AAGGAAGCCG CCAAGCTGGG CTTTAGCGTG
GCGCTGGTGC CCAAGGCCAA CGCGCCGAAA AAACCGATTG AAGGCTTGAC CATCCATGCG
GTGGAGCGCG TCGAGCAGGC GATGGAGGTG GTGCGGGGGC TGTAA
 
Protein sequence
MAKEKTVYVC SDCGGTSPKW QGKCPSCNAW NTLIESVPES LSPTKNRFAS LAKTAEIAIL 
GDIDAVDMAR TPTGHEELDR VLGGGMVEGG VVLIGGDPGI GKSTLLLQAL DSLQCSGQNT
LYVTGEESGA QVALRSRRLG LGHSQVRVLA EIQLEKILSV LAATQPDIAV IDSIQTVYSD
QLTSAPGSVA QVRECAAHLT RAAKASGVCI VLVGHVTKEG ALAGPRVLEH MVDTVLYFEG
DTHSSFRLVR AIKNRFGAVN EIGVFAMTEK GLKGVSNPSA IFLSQHAEPV PGSCVMVTLE
GTRPMLVEIQ ALVDSGGPSP RRLSVGLDKD RLAMLLAVLH RHAGVACMDQ DVFVNAVGGV
RISEPAADLA VLLAITSSLR GKPLPKGFFA FGEVGLAGEV RPAPRGQERL KEAAKLGFSV
ALVPKANAPK KPIEGLTIHA VERVEQAMEV VRGL