Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0500 |
Symbol | |
ID | 3964091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 518783 |
End bp | 520147 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637915331 |
Product | DNA repair protein RadA |
Protein accession | YP_521783 |
Protein GI | 89899312 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.81715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAAG AAAAAACCGT TTACGTTTGC TCCGATTGTG GCGGCACCAG CCCCAAATGG CAGGGCAAAT GCCCCAGTTG CAACGCCTGG AATACGCTGA TTGAATCGGT GCCAGAGAGC TTGTCCCCCA CCAAAAACCG TTTCGCCTCC CTGGCCAAGA CGGCAGAAAT CGCCATTCTG GGCGACATTG ACGCGGTGGA CATGGCGCGC ACCCCCACCG GCCACGAGGA GCTTGACCGT GTGCTGGGCG GCGGCATGGT CGAAGGCGGC GTGGTACTGA TCGGCGGCGA CCCCGGCATT GGCAAGTCCA CCCTGCTGCT GCAGGCGCTC GACTCGCTGC AATGCAGCGG CCAGAACACC TTGTACGTGA CGGGCGAAGA AAGCGGCGCG CAAGTCGCGC TGCGCTCGCG CCGCCTCGGG CTGGGCCACT CGCAGGTGCG GGTGCTGGCC GAGATCCAGC TGGAAAAAAT CCTGTCCGTT TTGGCGGCCA CCCAGCCTGA CATCGCCGTC ATCGACTCGA TCCAGACGGT CTACTCGGAT CAGCTCACGT CGGCCCCCGG TTCGGTGGCG CAAGTGCGCG AATGCGCAGC GCACCTGACG CGTGCGGCCA AGGCCAGCGG TGTCTGCATC GTGCTGGTCG GTCATGTCAC CAAGGAAGGC GCCCTGGCGG GCCCGCGTGT GCTGGAGCAC ATGGTGGACA CGGTGCTCTA CTTTGAAGGC GACACGCATT CAAGTTTCAG GCTGGTGCGC GCCATCAAGA ACCGCTTTGG CGCGGTGAAC GAAATTGGCG TCTTTGCCAT GACCGAAAAG GGTCTCAAAG GGGTGAGCAA CCCGAGCGCC ATTTTCCTGA GCCAGCACGC CGAGCCGGTG CCCGGCAGTT GCGTGATGGT GACGCTGGAG GGCACACGGC CGATGCTGGT GGAAATTCAA GCGCTGGTCG ACAGCGGTGG GCCCTCGCCC CGGCGTTTGA GCGTGGGCCT GGACAAAGAC CGCCTCGCCA TGCTGCTGGC CGTGCTGCAC CGCCACGCGG GCGTGGCTTG CATGGACCAG GACGTGTTTG TGAACGCGGT CGGCGGTGTG CGCATCAGCG AGCCCGCTGC CGATCTGGCG GTGCTGCTGG CGATCACGTC GAGCCTGCGC GGCAAGCCGC TGCCGAAGGG ATTCTTTGCC TTTGGCGAGG TTGGCCTGGC CGGTGAAGTG CGGCCCGCGC CGCGCGGTCA GGAACGGCTG AAGGAAGCCG CCAAGCTGGG CTTTAGCGTG GCGCTGGTGC CCAAGGCCAA CGCGCCGAAA AAACCGATTG AAGGCTTGAC CATCCATGCG GTGGAGCGCG TCGAGCAGGC GATGGAGGTG GTGCGGGGGC TGTAA
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Protein sequence | MAKEKTVYVC SDCGGTSPKW QGKCPSCNAW NTLIESVPES LSPTKNRFAS LAKTAEIAIL GDIDAVDMAR TPTGHEELDR VLGGGMVEGG VVLIGGDPGI GKSTLLLQAL DSLQCSGQNT LYVTGEESGA QVALRSRRLG LGHSQVRVLA EIQLEKILSV LAATQPDIAV IDSIQTVYSD QLTSAPGSVA QVRECAAHLT RAAKASGVCI VLVGHVTKEG ALAGPRVLEH MVDTVLYFEG DTHSSFRLVR AIKNRFGAVN EIGVFAMTEK GLKGVSNPSA IFLSQHAEPV PGSCVMVTLE GTRPMLVEIQ ALVDSGGPSP RRLSVGLDKD RLAMLLAVLH RHAGVACMDQ DVFVNAVGGV RISEPAADLA VLLAITSSLR GKPLPKGFFA FGEVGLAGEV RPAPRGQERL KEAAKLGFSV ALVPKANAPK KPIEGLTIHA VERVEQAMEV VRGL
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