Gene Rfer_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0493 
Symbol 
ID3964084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp510849 
End bp513335 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content63% 
IMG OID637915324 
Productmagnesium-translocating P-type ATPase 
Protein accessionYP_521776 
Protein GI89899305 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01524] magnesium-translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGCC TGACCAGTCT TGTCGCCGCC GCCCGGCTCA GGCAATACGG CCCCAATCGG 
CTTCAGCCCG CCAGACAACG GGCGCTGCTG CTGCAGTTTC TGGCGCACTT CAAAAACCCC
TTGGTCCTGG TGCTGCTGGC GGCCAGCGGC CTCTCCGCCT TGACGGGTGA CGTGACGGGC
GCCCTCATCA TCGGGGTGAT CGTGCTGATG AGTGTGACGC TGGACTTTGT GCAGTCCTAC
CGGGCCGGGC GTGCGGCCGA ACAACTGGCG CTGCAGGTGG CCATCACCGC CACCGTGCTG
CGGGACGGCC AGCGACGCGA ACTGCCGGTG ACCGAGCTGG TGCCTGGTGA CGTGGTGCTG
CTGTCGGCCG GCAATCTGGT GCCAGCCGAT GCGCGGCTGC TGGAAGCGGA TGACTTCTTC
GTCAACCAGG CACAACTCAC GGGCGAGCCT TATCCGGTGG AAAAGCGGGC CTCGTTGCCG
GACCAAGCCG ACGCTGAACA AGCCTCGTCC CAGGCCTGGG CGCTGGACGC GGCGGACGCG
GTCTTCATGG GCAGCTCCGT GGTCAGCGGC TCGGCGAGCG TGCTGATCGG ACGCACCGGC
AGCACCAGCG CGCTGGGCCA AATTGCAGTC AGCCTGGCTG ATAAGGCGCC ACCCACCGCC
TTCGAGATCG GCACCCGGCA TTTCGGCATG CTGATCATGC GCCTGACGTT TCTGCTGGTG
CTGTTCACCT TGCTGGTCAA TGTGGCCTTG CACCGACCGC TGCTCGAATC TTTTTTGTTC
GCGGTGGCGC TGGCCGTCGG CCTCACGCCT GAATTGTTGC CCATGGTGGT GTCGGTGACG
CTCACGCGCG GCGCCCTGCG CATGGCGGCC TTGAAAGTGA TCGTGAAGCG ACCATCGGCG
ATTCAGGACA TGGGCGCCAT GGACGTGTTG TGCACCGACA AGACCGGCAC CCTGACCGAA
GCCAAAATTC GACTGGAGCG CCACGTGGAC GCAGGGGGCC AGGACGATCC GCACGTTCTG
GAGCTGGCCT ACCTCAACAG CTATTTTGAG AGCGGCCTGA AAAGCCCGCT GGACGATGCC
ATCCTGGCGC ATGGAGAGAT CGATGTATCC GCCTGGACCA AGATCGACGA GGTGCCGTTT
GACTTCGAGC GCCGCCGCGT CTCGGTGCTG GTGCAGCGCG CCGGTGCGCG CCGGCTGGTG
GTCAAAGGCG CACCCGAAGA TATTGTTCGC TTGTGCACGC ACTACCAGGA CAGTGCAGAC
GCCACGGTGG CGCTCGACGC GGCGGCGCGT GTGCGCATCA CCCAACTGTT TGACAGTCTG
AGTGAGGAGG GTTTCCGGGT ACTTGGCATC GCCTCGCGCG ATGTGCCCGG CGACCACCCG
CACGCCATGG TGTCGGACGA AAGTGAGCTG GTGTTCGCGG GTTTTGCCGC CTTTCTGGAC
CCGCCCAAAG CCAGCGCCGG CGAGGCGCTG AAAGCGCTGG CGGCCAGCGG TGTGGCCGTG
AAGATCGTGA CCGGTGACAA CGAGCGGGTG ACGCGCCATG TCTGCACCCA GCTGGGTGTG
GCCATCGAGG GCGTACTGAC CGGCACCGAA CTGGCAGCCC TGAACGACGA CGCGCTGCGG
GCCCGGGTGG AGGGTGCCAA CCTGTTTTGC CGCGTCAACC CGGCGCAAAA AAACCGCATC
CTCCTGGCAC TCAAAGGCCG CGGCCATGTG GTGGGTTATC TGGGTGACGG CATCAACGAC
GCGCCTTCCC TGCACACGGC CGACGTCGGC ATCTCGGTCG AGGGCGCGGT GGACGTGGCC
AAGCAGGCGG CGGCCATGAT TCTGCTGGAG CGCGACCTGA TGGTGCTGCA CCAGGGTATT
CTGGAAGGCC GGCGCACCTT TGGCAATGTG ATGAAGTACA TCATGATGGC CACCAGCTCC
AACTTTGGCA ACATGTTCAG CATGGCCGCC GCCACCTTGT TTCTGCCGTT CCTGCCGATG
TTGCCGATGC AGATCTTGCT CAACAACCTG ATGTATGACG TGTCCGAAAT TACGCTGCCC
ATGGACAACG TGGACGAGGA GAACCTGGCC CAACCCAAAC GCTGGGACAT GACCTTCATC
CGCAATTTCA TGCTGACCAT CGGTCCCATC AGCTCACTGT TTGATTTCTT GACCTTCTAC
CTGCTGCTCA GTCTGTTCAA TGCGCACGAG TCCCTGTTTC GCACCGGCTG GTTTGTGGAG
TCCATCGCCA CCCAGGTGCT GGTTATTTTT GTCATCCGTA CCCGGCGCAA CCCCTTGCGC
AGCCACCCGA ATCGGTGGCT GGTGCTGACG TCTTTGGGGG TCGTGGTCAC GGCGATGCTG
TTGCCGTTCA CGCCATTGGC GCCCTATTTG GGGTTTACGC CCCTGCCGCT GTCTTACTTT
GGCTTGCTGG GGGCGTTGGT GGTCGCGTAT TTATTGATGG TTGAAGGGGG CAAGCAATGG
TTTTACCGGC GAGCGACGCG GGCCTGA
 
Protein sequence
MNGLTSLVAA ARLRQYGPNR LQPARQRALL LQFLAHFKNP LVLVLLAASG LSALTGDVTG 
ALIIGVIVLM SVTLDFVQSY RAGRAAEQLA LQVAITATVL RDGQRRELPV TELVPGDVVL
LSAGNLVPAD ARLLEADDFF VNQAQLTGEP YPVEKRASLP DQADAEQASS QAWALDAADA
VFMGSSVVSG SASVLIGRTG STSALGQIAV SLADKAPPTA FEIGTRHFGM LIMRLTFLLV
LFTLLVNVAL HRPLLESFLF AVALAVGLTP ELLPMVVSVT LTRGALRMAA LKVIVKRPSA
IQDMGAMDVL CTDKTGTLTE AKIRLERHVD AGGQDDPHVL ELAYLNSYFE SGLKSPLDDA
ILAHGEIDVS AWTKIDEVPF DFERRRVSVL VQRAGARRLV VKGAPEDIVR LCTHYQDSAD
ATVALDAAAR VRITQLFDSL SEEGFRVLGI ASRDVPGDHP HAMVSDESEL VFAGFAAFLD
PPKASAGEAL KALAASGVAV KIVTGDNERV TRHVCTQLGV AIEGVLTGTE LAALNDDALR
ARVEGANLFC RVNPAQKNRI LLALKGRGHV VGYLGDGIND APSLHTADVG ISVEGAVDVA
KQAAAMILLE RDLMVLHQGI LEGRRTFGNV MKYIMMATSS NFGNMFSMAA ATLFLPFLPM
LPMQILLNNL MYDVSEITLP MDNVDEENLA QPKRWDMTFI RNFMLTIGPI SSLFDFLTFY
LLLSLFNAHE SLFRTGWFVE SIATQVLVIF VIRTRRNPLR SHPNRWLVLT SLGVVVTAML
LPFTPLAPYL GFTPLPLSYF GLLGALVVAY LLMVEGGKQW FYRRATRA