| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0466 |
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| Symbol | |
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| ID | 3963785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 475587 |
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| End bp | 478484 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915297 |
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| Product | 5-methyltetrahydrofolate--homocysteine methyltransferase |
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| Protein accession | YP_521749 |
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| Protein GI | 89899278 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAA TTATTGCCCC CTCCATGAAG TTGTCCGGCC TGGAGCCGTT GACGATTGGC
CTTGCGCTGT CAGCCGATGC ACCCTCCCCA TCAGCCGGGG ACAGAGCAGA AGATCTGTCC
CCCATCGCTT CGTTTGTCAA CATCGGCGAG CGCACCAATG TGACTGGCTC CAAGGCCTTT
GCCCGCATGA TTTTGAACGG CGAGTTTGAC CAGGCCCTGA GCGTGGCGCG CCAGCAGGTC
GAGAACGGCG CCCAGATCAT CGACATCAAC ATGGACGAGG CCATGCTCGA CAGCCAGGCG
GCCATGGTGA AATTCTTGAA TTTGATAGCG TCAGAGCCCG ATATTTCAAG GGTTCCGGTC
ATGATTGACT CCAGCAAATG GAGTGTCATC GAGGCCGGCC TGCGCTGCGT GCAGGGCAAA
CCGGTGGTCA ACTCCATCAG CATGAAAGAA GGCGTGGACG CTTTCAAACA TCAGGCCAAG
CTGCTGCGCC GCTACGGAGC CGCTGCCGTG GTGATGGCGT TTGACGAGCA GGGCCAAGCC
GACACTTACG AGCGCAAGAT CGGCATTTGC GAGCGCGCCT ACCGCATCCT GGTCGATGAG
GTGGGTTTTC CGCCGGAAGA CATCATCTTC GATCCCAACA TCTTCGCCAT CGCCACCGGC
ATTGAAGAGC ACAACAACTA CGCGGTCGAT TTCATCAACG CCACGCGCTG GATCAAGCAG
CATCTGCCCG GTGCCAAGGT GTCTGGCGGT GTCAGCAACG TGTCTTTCAG CTTCCGGGGC
AACGACCCGG TGCGCGAAGC GATTCACACC GTGTTTCTGT ACCACGCCAT CAAGGCCGGC
ATGGACATGG GCATCGTCAA CGCCGGCATG GTCGGCGTCT ACGATGACCT GGAGCCGGAG
CTGCGCGAGC GCGTGGAAGA CGTGGTGCTG AACCGCAGGC CAGATGCGGG TGAGCGCCTG
GTCGAGATTG CCGAAACGGC CAAGAGCGGG GCCAAGGACG AGAGCAAAAA GCTCGAATGG
CGCGGCACGC CGGAGCACCC GGTGAGCGTG GAGCAGCGCC TCTCCCACGC GATGGTGCAC
GGCATCACCG ATTTCATCGT CCCTGACACC GAAGAAGCCT ACCAAGCCAT CCTCGCCAAG
GGCGGGCGGC CGCTGCATGT GATTGAAGGC CCGCTGATGG CGGGCATGAG CATCGTCGGC
GACCTGTTTG GCCAGGGCAA GATGTTCTTG CCGCAGGTGG TGAAAAGCGC ACGCGTGATG
AAGCAAGCCG TGGCGCATTT GATTCCCTAC ATTGAAGAAG AAAAGCGGCT CGATGAAGCG
GCCGGTCGCG ACGTCGCGAC CAAAGGCAAG ATCATCATCG CCACCGTCAA GGGCGACGTG
CATGACATTG GGAAAAACAT CGTCACCGTG GTCTTGCAGT GCAACAACTT TGACGTGGTC
AACATGGGTG TGATGGTGCC CTGTCACGAG ATTCTGGCGC GCGCCAAGGT AGAGGGCGCG
GACATCATTG GCCTGTCGGG ACTGATCACG CCCAGCCTGG AAGAGATGGC CTATGTGGCC
GGCGAGATGC AGAAGGACGA CTACTTTCGC ATCAAAAAAA TCCCGCTGCT GATTGGTGGT
GCCACCACCA GCCGGGTCCA CACTGCCGTC AAGGTGGCGC CCCACTACGC GGGCCCCGTG
GTCTATGTGC CCGATGCCTC GCGCAGCGTG GGCGTGGTGC AAAACCTGTT GGGCGATGCC
GCCAGCGGCT TTGTGGCCGA GCTCAACACC GATTACGAGC GCGTGCGCCA GCAGCACGCC
AACAAGAAGC AAATCCCGCT GTGGCCGCTG GCCAAGGCGC GCGCCAACAA GACGCCAGTG
GACTGGTCCG CTTACCAGCC AACCACGCCG AAGTTCATTG GCCGACGTGT CTTCAAGAAC
TTTGACCTGG GCGAGTTGGC GGGCTTTATC GACTGGGGCC CGTTCTTCCA GACCTGGGAC
CTGGCCGGAC CATTCCCGGC GATTCTGGAC GATGAGGTCG TGGGCGTTGA GGCCAAAAAA
ATCTATGCCG ATGGCCAGGC GATGCTGAAA AAAATCATCG AAGGCCGCTG GCTCACCGCC
AACGGCGTGC TGGGCCTGTA CCCCGCCAAC ACCGTCAACG ACGACGACAT CGAGCTCTAC
ACGGATGAGA CCCGCAGCAC CGTGGCCATG ACCTGGTACG GCCTGCGCCA GCAGGCGGCC
AAGGAAGAAA TTGACGGTGT GATGCGCCCG AGCCGCTGCC TGGCTGATTT TGTGGCACCC
AAAATTGCTA CTGAAAATAT AGCTTCTGAT GCAATGAAGA CGGGGGCTAC AGGCCAAAAA
GGCTTAAATA AGCCAGGGAA TGCCGAGACC GTGATTCCCG CGCAGGCGAG CATCCGGGAC
TACATCGGCG TCTTCGCTGT GACCGCGGGT ATCGGCATCG AGAAGAAAGA AGCGCAGTTT
CTGGCCGCGC ACGACGACTA CAGCGCCATC CTGCTCAAGT CCCTGGCCGA CCGGCTGGCC
GAAGCCTTTG CCGAGTGTCT GCACAAAAAA GTGCGCACCG ACCTGTGGGG TTATGCGCCT
GATGAAGCCC TGCCTGCCAA AGATTTGATC GCGGAAAAGT ACCAAGGCAT CCGCCCGGCG
CCGGGCTACC CGGCCTGTCC GGACCACAGC GTGAAGAAAG ACATGTTCGA GCTGCTGCAG
TGCGGCGACA TTGGCATGGG TGTGACCGAG AGTTTGGCCA TGACGCCAGC CGCCAGCGTC
AGTGGCTTCT ACATCGGCCA CCCGGACAGC ACCTATTTCA GCGTCGGCAA GATTGGCGAC
GACCAGCTCA AAGACTTGGC GATGCGCCGT GGCATGGATG AAAAAGCGCT GCAGCGGCTG
CTGGCGCCCA ATCTGTGA
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| Protein sequence | MSEIIAPSMK LSGLEPLTIG LALSADAPSP SAGDRAEDLS PIASFVNIGE RTNVTGSKAF
ARMILNGEFD QALSVARQQV ENGAQIIDIN MDEAMLDSQA AMVKFLNLIA SEPDISRVPV
MIDSSKWSVI EAGLRCVQGK PVVNSISMKE GVDAFKHQAK LLRRYGAAAV VMAFDEQGQA
DTYERKIGIC ERAYRILVDE VGFPPEDIIF DPNIFAIATG IEEHNNYAVD FINATRWIKQ
HLPGAKVSGG VSNVSFSFRG NDPVREAIHT VFLYHAIKAG MDMGIVNAGM VGVYDDLEPE
LRERVEDVVL NRRPDAGERL VEIAETAKSG AKDESKKLEW RGTPEHPVSV EQRLSHAMVH
GITDFIVPDT EEAYQAILAK GGRPLHVIEG PLMAGMSIVG DLFGQGKMFL PQVVKSARVM
KQAVAHLIPY IEEEKRLDEA AGRDVATKGK IIIATVKGDV HDIGKNIVTV VLQCNNFDVV
NMGVMVPCHE ILARAKVEGA DIIGLSGLIT PSLEEMAYVA GEMQKDDYFR IKKIPLLIGG
ATTSRVHTAV KVAPHYAGPV VYVPDASRSV GVVQNLLGDA ASGFVAELNT DYERVRQQHA
NKKQIPLWPL AKARANKTPV DWSAYQPTTP KFIGRRVFKN FDLGELAGFI DWGPFFQTWD
LAGPFPAILD DEVVGVEAKK IYADGQAMLK KIIEGRWLTA NGVLGLYPAN TVNDDDIELY
TDETRSTVAM TWYGLRQQAA KEEIDGVMRP SRCLADFVAP KIATENIASD AMKTGATGQK
GLNKPGNAET VIPAQASIRD YIGVFAVTAG IGIEKKEAQF LAAHDDYSAI LLKSLADRLA
EAFAECLHKK VRTDLWGYAP DEALPAKDLI AEKYQGIRPA PGYPACPDHS VKKDMFELLQ
CGDIGMGVTE SLAMTPAASV SGFYIGHPDS TYFSVGKIGD DQLKDLAMRR GMDEKALQRL
LAPNL
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