| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0459 |
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| Symbol | |
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| ID | 3963426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 468409 |
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| End bp | 470265 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637915290 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_521742 |
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| Protein GI | 89899271 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTTTGT CCATTCACCT GATCCTGCAA GAAGTCTTTG GCTACGACGC GTTCCGTGGC
CCCCAGCAAG CCATCATCGA GCACGTGGTG GCGGGCGGCG ACGCCTTGGT GCTGATGCCC
ACCGGCGGCG GCAAATCGCT GTGTTACCAG ATTCCGGCGA TCGCGCGCGA ACAAGCCGGC
CAGGGCATCA CGGTCGTGAT CTCGCCGCTG ATCGCGCTGA TGCACGACCA GGTCGGTGCG
TTGCATGAGG CCGGCATCAA AGCCGAGTTT CTCAACTCCA CCTTGTCGGG CGAGCAGGCG
ACGCAGGTGG AGCGACGGTT GCTGCGCGGC GACATCACCC TGCTCTACGC GGCGCCCGAG
CGCGTCACGA CACCGCGTTT TCTGGCGCAG CTTGATTCGC TGTACGAGCG CGGCAAACTG
AGCCTGTTTG CCATCGACGA GGCGCACTGC GTGAGCCAGT GGGGCCACGA CTTCCGGCCT
GAATACCGCG CTTTGACCGT GTTGCATGAG CGTTATGGCA GCGTGCCGCG CATCGCGCTG
ACGGCCACGG CCGACGCACT GACCCGCGCC GACATTGTGG AGCGGCTGCA GTTGCAGGAC
GCGCGCCTGT TTATCAGCAG CTTTGACCGC CCCAACATCA GTTACACCAT CGTCGAGAAG
CGAGATGCCA CGCAGCAGTT GCTGCGTTTC ATCACCAGTG AGCACATGGG CGATGCTGGT
ATCGTTTATT GTCAGTCGCG TAAACGGGTG GAAGACATTG CCAATCTGTT GTGCGACGAA
GGCATTGCCG CGCTGCCCTA CCACGCCGGA CTGGAAGCCA AGGTGCGCCA AGCGAACCAG
GACCAGTTTC TGCGCAGCGA GGGCATTGTG ATGGTGGCGA CCATCGCCTT CGGCATGGGC
ATCGACAAGC CCGATGTGCG TTTTGTCGCG CACCTGGACA TGCCGAAAAA CATCGAGGGC
TATTACCAGG AAACCGGCCG CGCCGGGCGC GATGGCCAAG CCGCGCAAGC CTGGATGTGC
TACGGCCTGC AAGACGTGGT CAACCAGCGC CGCATGATCG ACGAGAGCCC GGCCGGCGAA
GAATTCAAAC AGGGCCTGCG CGGCAAACTC GATGCGCTGC TGGGTCTGGC CGAGGCCACC
GATTGCCGCC GTGTGCGCCT GCTGCACTAC TTTGACGAAG AGAGCAAAGC CTGCGGCAAT
TGCGACAACT GCCTGCACCC ACCCGCCGTG TGGGACGGCA CCGACGCGGC GCGCAAGCTG
CTCAGCACCA TCTACCGCGT GCAGCAGATG GGCGGCAGTT ATGGCGCGGT GCACATCATG
GATATTTTGC GCGGCAAAAG CACCGAGAAG GTGACGCAGC GCGGCCATGA AACCCTGAGT
ACCTTTGGCA TTGGCGCGGA CTTGAGCGAA GTGCAACTGC GCGGCGTGCT GCGCCAGCTG
ATTGCCATCG GCGCCGTGGC GGTCGATGCC CAGGCCTTCA ATACCCTGCA ACTCACCGAT
GCCTCACGCG CCGTGCTCAG GGGCGAGGTG CCGGTGCAGT TGCGCGCCTC GGTATCGAGC
CCGGCCGAGC GCAAGGCCAA ACGCAGCAGC GCGGTCCACG CCGGCAGCGT CGGCAAAACG
CCCATCGCGC TGGATGCCGC GGCGCAGACC CGCTACACCG CCCTGAAAGC CTGGCGCGGC
GAAGTGGCCA AAGAACACAA CCTGCCGGCC TATGTGATTT TTCACGATGC CACGCTGGCG
GCCATCGCCG AGCGCGCGCC GCTGTCGCTC GATGATCTGC AAGGCATCAG CGGCATTGGC
GCGAAAAAGC TGGAGGCTTA TGGTGAAGAG GTGCTGCGCG TGATGGTGAG CGTGTGA
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| Protein sequence | MILSIHLILQ EVFGYDAFRG PQQAIIEHVV AGGDALVLMP TGGGKSLCYQ IPAIAREQAG
QGITVVISPL IALMHDQVGA LHEAGIKAEF LNSTLSGEQA TQVERRLLRG DITLLYAAPE
RVTTPRFLAQ LDSLYERGKL SLFAIDEAHC VSQWGHDFRP EYRALTVLHE RYGSVPRIAL
TATADALTRA DIVERLQLQD ARLFISSFDR PNISYTIVEK RDATQQLLRF ITSEHMGDAG
IVYCQSRKRV EDIANLLCDE GIAALPYHAG LEAKVRQANQ DQFLRSEGIV MVATIAFGMG
IDKPDVRFVA HLDMPKNIEG YYQETGRAGR DGQAAQAWMC YGLQDVVNQR RMIDESPAGE
EFKQGLRGKL DALLGLAEAT DCRRVRLLHY FDEESKACGN CDNCLHPPAV WDGTDAARKL
LSTIYRVQQM GGSYGAVHIM DILRGKSTEK VTQRGHETLS TFGIGADLSE VQLRGVLRQL
IAIGAVAVDA QAFNTLQLTD ASRAVLRGEV PVQLRASVSS PAERKAKRSS AVHAGSVGKT
PIALDAAAQT RYTALKAWRG EVAKEHNLPA YVIFHDATLA AIAERAPLSL DDLQGISGIG
AKKLEAYGEE VLRVMVSV
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