| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0456 |
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| Symbol | |
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| ID | 3963423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 462257 |
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| End bp | 463996 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637915287 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_521739 |
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| Protein GI | 89899268 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACCC CGCCCAAACG TGTATTGCGG TCCGCCGCCT GGTTCGGAGC AGCCGACAAA
AATGGCTTCA TGTACCGCAG TTGGATGAAG AACCAGGGCA TTCCGGATCA TGAGTTTCAG
GGCAAGCCGA TCATTGGCAT CTGCAACACC TGGTCTGAAC TGACACCCTG CAACGCGCAC
TTTCGCAAGA TTGCCGAGCA CGTGAAGCGC GGCATCTCCG AGGCCGGCGG CTTCCCGGTC
GAATTCCCGG TGTTCTCCAA CGGTGAGTCC AATTTGCGCC CCACCGCCAT GCTGACGCGC
AACCTGGCCA GCATGGATGT CGAGGAATCC ATTCGCGGCA ACCCGATGGA TGCCGTGGTG
CTGCTGGTGG GCTGCGACAA GACCACACCC GCGCTGCTGA TGGGCGCTGC CAGCTGCGAC
ATCCCGACCA TCGTCGTGAC CGGCGGCCCG ATGCTGAACG GCAAGCATGA AGGCCGTGAC
ATCGGCTCCG GCACGGTGGT CTGGCAGCTG CACGAAGCGG TCAAGGCGGG GAAAATCTCG
CTCAATGAGT TCATGTCGGC CGAAGCCGGC ATGTCGCGCT CGGCCGGCAC CTGCAACACC
ATGGGCACCG CCTCCACCAT GGCCTGCATG GCCGAGGCGC TGGGCACCTC GCTACCGCAC
AACGCCGCCA TTCCGGCCGT GGATGCGCGC CGCTACGTGC TGGCCCACAT GTCGGGCATG
CGCATTGTGG ACATGGTGTG GGAGGACCTG AAGTTGTCCA AAATCCTGAC GCGCGAAGCG
TTTGAAAACG CCATTCGTGT CAATGCAGCC GTGGGCGGCT CCACCAACGC GGCCATTCAC
CTCAAGGCCA TTGCCGCTCG CATCGGCGTG CCGCTGGAAC TCGACGACTG GACCACCGTG
GGCAAGGGCA CACCGACGCT GGTGGACCTG CAGCCGTCAG GCCGTTTCCT GATGGAAGAT
TTCTATTACG CGGGCGGCCT CCCCGCTGTG TTGCGCCGCA TGGGCGAGGG CGGCCTGTTG
CCGCACAAGG ATGCGCTGAC GGTCAACGGC AAGTCCATCT GGGAAAACGT GCTGGACGCC
CCGATCCACA ACCCGGAAGT GATCCGGCCG CTCGACAAGC CGCTGGTCGC GGATGGCAGC
ATCTGCGTGC TGCGCGGCAA TCTGGCGCCG CGCGGCGCCG TGCTGAAGCC GTCAGCGGCC
ACGCCCGCGC TGATGAAACA CCGCGGCAAG GCAGTCGTCT TCGAGGATAT TGACCACTAC
AAGGCCCGCA TCGGCGACCC GGACCTGGAG ATCGATGCCG ATTCGGTGAT GGTGCTCAAG
AACTGCGGCC CCAAGGGCTA CCCCGGCATG GCCGAAGTGG GGAACATGGG CCTGCCGCCC
AAGCTGCTGG CGCAAGGCAT CACCGACATG GTTCGCATCT CGGATGCCCG CATGAGCGGC
ACGGCCTACG GTACCGTGGT GTTGCATGTG GCGCCGGAAG CGGCTGCCGG CGGGCCGCTG
GCGATCGTGC GCGATGGCGA CTGGATCGCA CTCGACAGTT ACGCGGGCAA GCTGGACCTG
GAGATCAGTG AGGCTGAGAT CGCGCAGCGC CAGGCCGAGC TGCAGGCCAA GCCCGCAGCG
CCGGCCAAGG GCGGCTACCA GCAGTTGTAC ATCGACCGGG TGCTGCAGGC CGACGAAGGC
TGCGATTTCG ATTTTCTGGT CGGCTGTCGC GGCGCCGAGG TGCCCAGACA TTCGCACTGA
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| Protein sequence | MSTPPKRVLR SAAWFGAADK NGFMYRSWMK NQGIPDHEFQ GKPIIGICNT WSELTPCNAH
FRKIAEHVKR GISEAGGFPV EFPVFSNGES NLRPTAMLTR NLASMDVEES IRGNPMDAVV
LLVGCDKTTP ALLMGAASCD IPTIVVTGGP MLNGKHEGRD IGSGTVVWQL HEAVKAGKIS
LNEFMSAEAG MSRSAGTCNT MGTASTMACM AEALGTSLPH NAAIPAVDAR RYVLAHMSGM
RIVDMVWEDL KLSKILTREA FENAIRVNAA VGGSTNAAIH LKAIAARIGV PLELDDWTTV
GKGTPTLVDL QPSGRFLMED FYYAGGLPAV LRRMGEGGLL PHKDALTVNG KSIWENVLDA
PIHNPEVIRP LDKPLVADGS ICVLRGNLAP RGAVLKPSAA TPALMKHRGK AVVFEDIDHY
KARIGDPDLE IDADSVMVLK NCGPKGYPGM AEVGNMGLPP KLLAQGITDM VRISDARMSG
TAYGTVVLHV APEAAAGGPL AIVRDGDWIA LDSYAGKLDL EISEAEIAQR QAELQAKPAA
PAKGGYQQLY IDRVLQADEG CDFDFLVGCR GAEVPRHSH
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