| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0450 |
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| Symbol | |
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| ID | 3963417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 455735 |
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| End bp | 456706 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637915281 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_521733 |
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| Protein GI | 89899262 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.431349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGA GAAAACTGGT TATTGGCCTG TCTTTGGCCC TGGGTTTGGC GGCCACCGCC
GCAGCCCAGA CCGTCATGAA GATCAACATT GCCATCGCGC AAAATTCGCA CCAGGGCATT
GCCATCGACA CCTTCGCCAA GGAAGTTGGG ACCCAAACCA ACGGTCGCTA CAAGATCGAG
ACTTTTTACA ACGCTTCACT CGGCAGTGAG CGTGAATCGA TCGAAGCCGT TCAACTGGGC
ACGCAGGAGC TGACTTTCAC ATCCACCGGC CCGGTGCCCA ACTTTGTGCC GGAAGCCAAG
ATTCTGGACG TTCCCTTTTT GTTTCGTGAC AAGGCGCATG CCCGTGCCGT GCTGGACGGC
CCGATCGGCC AGGACATGCT GGCCAAGTTC GACTCCAAGG GCTTCAAGGC TTTGGCCTGG
GGCGAGAACG GCATGCGCAA CATGACCAAC AGCAAGCACA CCATCAAGAC CCCGGATGAC
CTCAAGGGCC TGAAGATTCG CACCATGGAA AACCCGGTGC ACGTGGCCGC CTACAAAGGC
TTGGGCATTG TGACGACGCC GATGGCCATG GCCGAGGTAT TCACTGCGCT GCAGCAGGGC
ACGGTAGACG GCCAGGAAAA CCCCTTGTCC GTGATCATGG CAGCCAAATT GGACCAGGTG
CAAAAGTACG TGTCACTGAC CGGCCACGTC TATTCACCCG CCATCTTTTT GATGAACAAG
GCAGCGTTCG ACAAGCTCAG CCCGGCTGAC CAGAAGGTGT TTCTGGAAGC TGCCAAGGTG
GCCGTCAAGG CCAACCGGGC CCGGGTTGAC GCCGACGATG CCATGGGCGT GACTTACCTG
CGCGGCAAGG GTATGGAGGT GACAGAGAGC CTGGACAAAT CCAAATTCGT CGCCAAGCTT
GCACCGGTGT ACGCTGACTT CGAAAAGCAG TTCGGCAAAG CCAATATGGA CAAGATCCGC
AACTACAAGT AA
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| Protein sequence | MKLRKLVIGL SLALGLAATA AAQTVMKINI AIAQNSHQGI AIDTFAKEVG TQTNGRYKIE
TFYNASLGSE RESIEAVQLG TQELTFTSTG PVPNFVPEAK ILDVPFLFRD KAHARAVLDG
PIGQDMLAKF DSKGFKALAW GENGMRNMTN SKHTIKTPDD LKGLKIRTME NPVHVAAYKG
LGIVTTPMAM AEVFTALQQG TVDGQENPLS VIMAAKLDQV QKYVSLTGHV YSPAIFLMNK
AAFDKLSPAD QKVFLEAAKV AVKANRARVD ADDAMGVTYL RGKGMEVTES LDKSKFVAKL
APVYADFEKQ FGKANMDKIR NYK
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