| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0447 |
|---|
| Symbol | |
|---|
| ID | 3963414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 453032 |
|---|
| End bp | 453826 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637915278 |
|---|
| Product | GntR-like |
|---|
| Protein accession | YP_521730 |
|---|
| Protein GI | 89899259 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA CTCCTCCCAT GACCGCTCAG TTCAAACCCA TCACGCCCGG CGCCTATCTT
TCCGATCAGG TGGCTGATGC GCTTGCCGCT GAGATCCGGG CCGGACGGCT GGCCGTGGGG
GCCAAGCTGC CGACCGAGGC GGCGCTGGTA GAGCAATTTG CGGTCAGCCG CACGGTGGTG
CGGGAAGCGG TCTCGCGGCT CAAGTCGCTG GGCCTGGTCG ATTCACGGCA AGGCAGTGGT
GTGTATGTCA AGGAAGTGGG CTTTTCGCCG CTCAACTTTG ATGCCAAGTC GACCGTCTCC
CGGCAGGCGG TGATCCAGAT GGTGGAGGTG CGCCGCGCGC TGGAGGCCGA GGTGGCCGGC
TTGGCGGCGC AACGGCGCAC CCAGGCCGAT ATCAAGCGCA TCGGCAAATC CATTGCGCTA
CTGGACAAGG CAGTGCAAGC CGGTGGCGAC GGCGTGGACG AAGACGTGCA ATACCACCGC
GCCATTGCGG AGGCCGCGCG CAACCCTTTT CTGATCGGCA CGCTGGAATA CCTGGGCCAG
TTCCTGCGCG GGGCCACCCG CGTCACGCGG GCCAATGAGG CGCGCCGGGC CGACTTCGCA
CGCCAGGTGA GTGCCGAGCA TGACAAGATT TTGCGCGCCA TTGAAGCCGG CGACGCGGCC
GCGGCGCGCA AGGCCGCGGC GCGGCACATG GACAACGCCA TCCTGCGCAT TGAGCAGGCT
GACCCGGCGT TTTGGCAGCA GGCGGGGGTG CAACTGGCAC GGCCTCTGGT CTTCGGCCTG
CCGCCGCGAA GCTGA
|
|---|
| Protein sequence | MNLTPPMTAQ FKPITPGAYL SDQVADALAA EIRAGRLAVG AKLPTEAALV EQFAVSRTVV
REAVSRLKSL GLVDSRQGSG VYVKEVGFSP LNFDAKSTVS RQAVIQMVEV RRALEAEVAG
LAAQRRTQAD IKRIGKSIAL LDKAVQAGGD GVDEDVQYHR AIAEAARNPF LIGTLEYLGQ
FLRGATRVTR ANEARRADFA RQVSAEHDKI LRAIEAGDAA AARKAAARHM DNAILRIEQA
DPAFWQQAGV QLARPLVFGL PPRS
|
|---|
| |