| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0445 |
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| Symbol | |
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| ID | 3962857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 450751 |
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| End bp | 452022 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637915276 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_521728 |
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| Protein GI | 89899257 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA TCTTGCTTGG CTGCATTGCC GACGACTTCA CCGGCGCCAC CGATCTGGCC
AACAACCTGG TGCGCGCCGG TCTGCGCGTC GTGCAGGCAA TGGGCGTGCC GGCGCAGCCG
CTCGACGCCG ATGCCGACGC CGTGGTGGTG GCGCTCAAGT CACGCACCTT GCCTGTGGAT
GAAGCCATTG CGCAGTCGCT GGCGGCGCTG CGCTGGCTGC AGGCGCAGGG CGCGCAGCAA
ATCTACTTCA AGTACTGCTC CACCTTTGAC AGCACGGCGC AAGGCAATAT CGGCCCGGTG
GCGGAGGCGC TGATGGACGC GCTCGGGACC GACTTCACCA TCGCCACGCC AGCCTTCCCG
GACAACCAGC GCACCGTGTT CAAGGGCCAT CTGTTTGTCG GCGACGTGCT GCTCAACGAG
AGCGGCATGC AAAACCACCC GCTCACCCCC ATGACGGACG CCAACCTGGT GCGCGTGCTG
CAGGGGCAAT GCCGCCGCCC GGTGGGTCTG ATCGACTACA AGGTGGTGGC GCAGGGCGAG
GCCGCGATTC GCACGCGCAT CGACCAGCTG CGTGCGCAGG GGGTCGGCCT GGCTGTCGTG
GACGCCATCT CCAACGATGA CCTGCTGCGC CTGGGGGCGG CGCTCAGCGA CATGCCGCTG
GTAACGGGCG GCTCGGGCGT CGCCATTGGC CTGCCCGCCA ATTTCGGGAT TGCACCCTCC
AGCACTGCCA GCGCGCTACC CCGAGCCACC GGCTTGCAGG CGGTCGTGTC GGGCAGTTGC
TCGCTGGCGA CCAATCGGCA GGTGCTGGCC TTTATCCAGG CGGGCCGGCC GGCGTTGGGT
ATCGACGCCT TGCAGATCGC CGCCGGGGTC GATGTGACGA CGCAGGCGCT GGCTTGGGCC
GCGCCACTGC TGAGCCAGGG TCCCGTGCTG ATTTATTCGA CCGCCGATGC CAATGCGGTC
AAGGCGGTGC AAGCGCAGCT CGGCGTGGAA GAAGCCGGCG CCATGGTAGA GCGAACCCTG
GCCGCCATCG CGCTCGGTTT GGTGGCGCTT GGCGTGCGCC AGCTGGTCGT GGCCGGTGGC
GAAACCTCGG GCGCCTGCGT GCAGGCTTTG AACATCACGC AAATGAAGAT CGGCCCGCAA
ATCGACCCCG GTGTGCCCTG GTGCCATGCC CAAGCCGACG CCGCACCTGG GGCGGGCCTG
CACCTGACGC TGAAGTCCGG CAACTTTGGC GCCGATGACT TCTTCAGCAA AGCTTTTGCG
TTGCTGGCAT GA
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| Protein sequence | MKKILLGCIA DDFTGATDLA NNLVRAGLRV VQAMGVPAQP LDADADAVVV ALKSRTLPVD
EAIAQSLAAL RWLQAQGAQQ IYFKYCSTFD STAQGNIGPV AEALMDALGT DFTIATPAFP
DNQRTVFKGH LFVGDVLLNE SGMQNHPLTP MTDANLVRVL QGQCRRPVGL IDYKVVAQGE
AAIRTRIDQL RAQGVGLAVV DAISNDDLLR LGAALSDMPL VTGGSGVAIG LPANFGIAPS
STASALPRAT GLQAVVSGSC SLATNRQVLA FIQAGRPALG IDALQIAAGV DVTTQALAWA
APLLSQGPVL IYSTADANAV KAVQAQLGVE EAGAMVERTL AAIALGLVAL GVRQLVVAGG
ETSGACVQAL NITQMKIGPQ IDPGVPWCHA QADAAPGAGL HLTLKSGNFG ADDFFSKAFA
LLA
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