| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0439 |
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| Symbol | |
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| ID | 3962851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 444751 |
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| End bp | 445749 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915270 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_521722 |
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| Protein GI | 89899251 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.450126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGTTG GATTAACTCA GCCGAACCGA AGGACGGCGC CCTCGCTGGG GCGAACCTTG
CTCGACTTAT TCCGGGCCAA GGAGATGAGC GTACTTCTTG CTGTCATTTT GGTGGGTGGC
GGCATCGCCA TGGTGACGCC CTACTTCCTG ACAACGGACA ATCTGATGGG CGTCTTCCGT
TCGTTCTCGC TGACGGCCAT CATGTCCATC GGAATGGTCA TGGTGATTAT CACCGGCGGC
ATTGACCTCT CCGTCGGCTC CGTGATGGGA TTGTCCGGGC TCGTCACCGC CCTGGCCTTT
CAGAATGGGT TTTCAACCGT GGTTAGTGTG TCGTGCGGGC TGGGCGTCGG TTTCCTTTTT
GGCTTGACGA ACGGTTTGCT TGTGACCGCA GGGCGGCTAC CCCCGTTCAT CGCGACGCTA
GGCACGTTGA GCATTGGTCG GGGGCTGATG TACATCGTGA CCAAGGGCGT TCCGGCAACC
CCCGAGACGC CCGAGGCCTT TAGCGTGATC GGCCAGGGGT ATATCGGCAG CGTGCCAGCG
CCAGTGATCA TCATGCTGGT GCTCGCGCTG ATCTTTTCGG TGATCATGAC ATTCACCACC
TTTGGCCGCC ATGTTTATGC GACCGGCGGC AACGAGCAGG CTGCGTGGCT GAGCGGCGTC
AACACCTCGC GCATCAAGCT CACGGTTTAC ACGCTGTCAG GCACGATCTC CGCACTGGCC
GGCATTGTGG CCTTCTCACG CTATCTATCG GCCGAGCCCG CGTCCGGGTT TGGCGTGGAA
CTCGACGTTA TCGCCGCAGC AGCTATCGGC GGCGCGAGCC TGGCGGGTGG TGTGGGCAGC
GTGATGGGCG CCATCCTCGG TGCAGCGCTC ACTGGAATCA TCGCCAACGG CGTGGTCCTT
ATGAACATTA ATACCTATGC ACAGCAGGCC ATCACGGGTG CCGTCATCCT GATTGCCGTA
AGTATCGACG TGTGGCGTAA CGCCAGAAAG GAGCGGTAA
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| Protein sequence | MDVGLTQPNR RTAPSLGRTL LDLFRAKEMS VLLAVILVGG GIAMVTPYFL TTDNLMGVFR
SFSLTAIMSI GMVMVIITGG IDLSVGSVMG LSGLVTALAF QNGFSTVVSV SCGLGVGFLF
GLTNGLLVTA GRLPPFIATL GTLSIGRGLM YIVTKGVPAT PETPEAFSVI GQGYIGSVPA
PVIIMLVLAL IFSVIMTFTT FGRHVYATGG NEQAAWLSGV NTSRIKLTVY TLSGTISALA
GIVAFSRYLS AEPASGFGVE LDVIAAAAIG GASLAGGVGS VMGAILGAAL TGIIANGVVL
MNINTYAQQA ITGAVILIAV SIDVWRNARK ER
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