| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0413 |
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| Symbol | |
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| ID | 3962787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 422676 |
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| End bp | 423947 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637915246 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_521698 |
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| Protein GI | 89899227 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACACG TATTACGCGC CGGCGCTATC GCTGCGGTGC TGGTCATGGC TGTGCCTGCT
GGCGTGCTCG CCGGCGAAGC GCTGCCCGGT GCCAGTCTGC AAACCCTGCT TGAACTGGCC
CAAGCGAGCA ATCCGGAGTA CACCAGCATG CGTTTCGAGG CGCAGGCCGC GGCTGAACGT
GTCAAGCCTG CGGGCGCTTT GATGGACCCG AAATTTCGCA TCGAGTGGAT GGACATCACG
AAAATGGGTG AGCAGAACCC AACGCTGTGG CCCAGTGATG TCGGCAGCAC CAAATACACA
CTGATGCAGG ATATTCCGTG GTTTGGCAAA CGTGACTTGA AACGCGACAT TGCTCACTTT
GACGCTGAAG GCAGCCAGGG CAAGGCGCTG GGCACCTGGC TTGAGCTGGC AGCCAGGGTC
AAGACCTTGC AGGCGCAGCG CTACTACCTG CGCGGCAATA AGGAATTGAC GCAAGAAATT
CTTGACCTGA TGGCGCGCCT GGAGCAGGTC GCCCAAAGCC GTTATGCCGG TGGTCTGGCT
GCACAACAAG ATGTCATCCG GGCCCAGGTG GAGCAAACCA ACATGAGGAA TGAGTTGGTG
ATGATCGAGA GCGAAAGCCT GCAGGTTGAT GCGCGCTTGA ATGCCTTGTT GGCGCGCCCT
GCGATGGCAG CGCTGGCCGC ACCCGAGAGC CTGCGCCCCC TGCCTGCACA GTCACTGCTG
GACGCGGCAA AGCTGGAAGA GCGTGTGCGC AACCGCAACC CGCAGTTGTT TGTTGAGGAA
GCCCGCATCC AGGCGGCCCA GAAGAGCCGG GACTTGACCT ACAAGAACCG CTATCCCGAT
TTCACGCTCA GTATTTCGCC CACCCAGACT CAAACGAACG TCAAGGAATG GGGCTTGATG
CTGGAGGTCA ACATTCCGCT GCAGCAGTCC TCCCGGCGCG CCATGGAGCG TGAAGCGGAA
GCCATGCTCT CGGCCGCGCG CGCGCGCAAG GAAGCCGCTG CCAACCAGGT GCTGGCTGAA
CTGGCGCAGA ACCTGGCCGC GATCGAAGCG GCACGCCGCA CGGAACTGCT GGCCAGCAGC
AGCTTGCTGC CGCAGGCGGA TCTGACGTTC AGTTCCGCGA TGGCCAGCTA CGAGAACGGC
AAGCTGGACT TTGCCACCCT GCTCGACGCC CAGCGCCAGA TCCGCCAGGC CAAGCAAAGC
CGAATCAAAG CCCAGTTTGA AGGGCAAATG CGTTTGGCCG AAATCGAAAA ACTATTGGGA
GAAGATTTAT GA
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| Protein sequence | MQHVLRAGAI AAVLVMAVPA GVLAGEALPG ASLQTLLELA QASNPEYTSM RFEAQAAAER
VKPAGALMDP KFRIEWMDIT KMGEQNPTLW PSDVGSTKYT LMQDIPWFGK RDLKRDIAHF
DAEGSQGKAL GTWLELAARV KTLQAQRYYL RGNKELTQEI LDLMARLEQV AQSRYAGGLA
AQQDVIRAQV EQTNMRNELV MIESESLQVD ARLNALLARP AMAALAAPES LRPLPAQSLL
DAAKLEERVR NRNPQLFVEE ARIQAAQKSR DLTYKNRYPD FTLSISPTQT QTNVKEWGLM
LEVNIPLQQS SRRAMEREAE AMLSAARARK EAAANQVLAE LAQNLAAIEA ARRTELLASS
SLLPQADLTF SSAMASYENG KLDFATLLDA QRQIRQAKQS RIKAQFEGQM RLAEIEKLLG
EDL
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