Gene Rfer_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0406 
SymbolmetX 
ID3961620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp412017 
End bp413159 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content62% 
IMG OID637915239 
Producthomoserine O-acetyltransferase 
Protein accessionYP_521691 
Protein GI89899220 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2021] Homoserine acetyltransferase 
TIGRFAM ID[TIGR01392] homoserine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGA TCGCTACCCC CCAGTCCATG CAGTTCGATA CTGTCTTGCC CTTGCAAAGT 
GGCGCCTCTC TGCGCGGCTA CGCGCTGAGT TTTGAAACCT ATGGCGAGCT CAACGCCGAC
AAGTCCAACG CCGTGCTGAT CTGCCACGCC CTGAACGCCT CGCATCATGT GGCAGGCAGC
TACGCGGGCC AGGACAAATC CGAGGGCTGG TGGGACAACA TGATCGGCCC CGGCAAGCCG
CTTGACACGG ACAAATTCTT TGTCATCGGC GTCAACAACC TGGGCTCCTG CTTTGGCTCC
ACCGGCCCGA TGCACATCAA CCCCGACACC GGGCGTGTCT ATGGCGCGGA TTTTCCGGTC
GTCACGGTCG AAGACTGGGT CAATGCGCAG GCCCGCTTGC TCGATGCCCT GGGCATCCAG
ACGCTCGCCG CCGTGATGGG TGGCAGCCTG GGCGGCATGC AGGCACTGAG CTGGGCGCTG
CAGTACCCCG AGCGCGTCCG GCACGCGGTG GTGATTGCCA GCGCACCCAA CCTGACGGCC
GAGAACATCG CCTTCAACGA AGTGGCGCGC CGGGCCATCG TGACCGACCC CGACTTCCAT
GGCGGGCACT TTTACGCCCA TGGCACCGTG CCCAAGCGCG GTCTGCGCAT TGCCCGCATG
ATTGGCCACA TCACCTACCT GAGTGATGAC GTCATGAACG AGAAGTTTGG CCGCCAGCTG
ATCGCGGCGG GCAAAGGCGG TGCGCAGGAC GATTACCTGT TCAGCACGCT GGAGGCTGAA
TTCCAGATCG AGAGCTACCT GCGTTACCAG GGCGACAAGT TTGCCGAGTA CTTTGACGCC
AACACCTACC TGCTGATCAC GCGTGCGCTG GACTATTTTG ACCCGGCCCG TACCTATGGC
GGCGACCTGA GCCACGCGCT GGCGCGCGCC AGCTGCAAAT TCCTGCTGGT GAGCTTTACC
ACCGACTGGC GCTTTGCGCC CAAGCGCAGC CGCGAGATCG TCAAGGCGCT GCTGCACAAC
CGGCGCGACG TGAGTTATGC CGAGATCGAC GCGCCGCATG GTCATGATGC CTTTTTGCTC
GATGACCCCC GTTATATGGG CGTTTTGCGC TCTTATTTTG ATAGTATTAA GGAGCCGGCA
TGA
 
Protein sequence
MKMIATPQSM QFDTVLPLQS GASLRGYALS FETYGELNAD KSNAVLICHA LNASHHVAGS 
YAGQDKSEGW WDNMIGPGKP LDTDKFFVIG VNNLGSCFGS TGPMHINPDT GRVYGADFPV
VTVEDWVNAQ ARLLDALGIQ TLAAVMGGSL GGMQALSWAL QYPERVRHAV VIASAPNLTA
ENIAFNEVAR RAIVTDPDFH GGHFYAHGTV PKRGLRIARM IGHITYLSDD VMNEKFGRQL
IAAGKGGAQD DYLFSTLEAE FQIESYLRYQ GDKFAEYFDA NTYLLITRAL DYFDPARTYG
GDLSHALARA SCKFLLVSFT TDWRFAPKRS REIVKALLHN RRDVSYAEID APHGHDAFLL
DDPRYMGVLR SYFDSIKEPA