Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0406 |
Symbol | metX |
ID | 3961620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 412017 |
End bp | 413159 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915239 |
Product | homoserine O-acetyltransferase |
Protein accession | YP_521691 |
Protein GI | 89899220 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2021] Homoserine acetyltransferase |
TIGRFAM ID | [TIGR01392] homoserine O-acetyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATGA TCGCTACCCC CCAGTCCATG CAGTTCGATA CTGTCTTGCC CTTGCAAAGT GGCGCCTCTC TGCGCGGCTA CGCGCTGAGT TTTGAAACCT ATGGCGAGCT CAACGCCGAC AAGTCCAACG CCGTGCTGAT CTGCCACGCC CTGAACGCCT CGCATCATGT GGCAGGCAGC TACGCGGGCC AGGACAAATC CGAGGGCTGG TGGGACAACA TGATCGGCCC CGGCAAGCCG CTTGACACGG ACAAATTCTT TGTCATCGGC GTCAACAACC TGGGCTCCTG CTTTGGCTCC ACCGGCCCGA TGCACATCAA CCCCGACACC GGGCGTGTCT ATGGCGCGGA TTTTCCGGTC GTCACGGTCG AAGACTGGGT CAATGCGCAG GCCCGCTTGC TCGATGCCCT GGGCATCCAG ACGCTCGCCG CCGTGATGGG TGGCAGCCTG GGCGGCATGC AGGCACTGAG CTGGGCGCTG CAGTACCCCG AGCGCGTCCG GCACGCGGTG GTGATTGCCA GCGCACCCAA CCTGACGGCC GAGAACATCG CCTTCAACGA AGTGGCGCGC CGGGCCATCG TGACCGACCC CGACTTCCAT GGCGGGCACT TTTACGCCCA TGGCACCGTG CCCAAGCGCG GTCTGCGCAT TGCCCGCATG ATTGGCCACA TCACCTACCT GAGTGATGAC GTCATGAACG AGAAGTTTGG CCGCCAGCTG ATCGCGGCGG GCAAAGGCGG TGCGCAGGAC GATTACCTGT TCAGCACGCT GGAGGCTGAA TTCCAGATCG AGAGCTACCT GCGTTACCAG GGCGACAAGT TTGCCGAGTA CTTTGACGCC AACACCTACC TGCTGATCAC GCGTGCGCTG GACTATTTTG ACCCGGCCCG TACCTATGGC GGCGACCTGA GCCACGCGCT GGCGCGCGCC AGCTGCAAAT TCCTGCTGGT GAGCTTTACC ACCGACTGGC GCTTTGCGCC CAAGCGCAGC CGCGAGATCG TCAAGGCGCT GCTGCACAAC CGGCGCGACG TGAGTTATGC CGAGATCGAC GCGCCGCATG GTCATGATGC CTTTTTGCTC GATGACCCCC GTTATATGGG CGTTTTGCGC TCTTATTTTG ATAGTATTAA GGAGCCGGCA TGA
|
Protein sequence | MKMIATPQSM QFDTVLPLQS GASLRGYALS FETYGELNAD KSNAVLICHA LNASHHVAGS YAGQDKSEGW WDNMIGPGKP LDTDKFFVIG VNNLGSCFGS TGPMHINPDT GRVYGADFPV VTVEDWVNAQ ARLLDALGIQ TLAAVMGGSL GGMQALSWAL QYPERVRHAV VIASAPNLTA ENIAFNEVAR RAIVTDPDFH GGHFYAHGTV PKRGLRIARM IGHITYLSDD VMNEKFGRQL IAAGKGGAQD DYLFSTLEAE FQIESYLRYQ GDKFAEYFDA NTYLLITRAL DYFDPARTYG GDLSHALARA SCKFLLVSFT TDWRFAPKRS REIVKALLHN RRDVSYAEID APHGHDAFLL DDPRYMGVLR SYFDSIKEPA
|
| |