Gene Rfer_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0404 
Symbol 
ID3961618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp410237 
End bp411358 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content66% 
IMG OID637915237 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_521689 
Protein GI89899218 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACACC GCACTGCCAC CCTGTTTGAC CCGGTCCATG CCGGCGACCT GACACTTGCC 
AACCGCATCG TGATGGCACC GCTGACGCGC AACCGCGCGC CCGATGCCAT TCCCACGCCG
CTGATGGCCC AGTACTACAC CCAGCGCGCC AGCGCCGGCC TGATCATTTC TGAAGCCACC
GCCATCAGCC ATCAGGGCCA GGGCTATGCC GACGTGCCCG GCTTGTATGG CTCGGAGCAG
TTGGAGGGCT GGAAACATGT CACCCACGGC GTGCACGGCG CCGGCGGCAA GATCGTGGTG
CAGCTCTGGC ATGTGGGCCG GGTCTCGCAC ACCAGCCTGC AGCCCGAGGG CGGCCAGCCG
GTGGCGCCGT CGGCCATCGC CGCCAAGACC AAAACCGTGT TGTTGCAGGA CGGCGTGCCG
GTCTTTGTCG ACACGTCGGA GCCGCGTGCG CTGCAGGCCT ATGAATTGCC TGACATCGTG
CACACCTACC AGGCGGCCGC CCGCAACGCG GTGCAGACCG CCGGCTTTGA CGGGGTCGAG
ATTCACGCCG CCAACGGCTA TTTGCTGGAC CAGTTTCTAA AAGCGGGCTC CAACCTGCGC
CGTGACGACT ACGGTGGCAG CATCGAAAAC CGCGCCCGCC TGCTGCTCGA AGTGATGCAG
GCCGTGACCA CCGCCGTGGG CGCCGGTCGC GTCGGCATTC GCCTGTCGCC CGTGACCCCG
GCCAACGATG CCTTTGACCC CGATCCGCAA CCTCTGTTTG ACTACGTGGT GCGCGAACTG
GCCACGTTCA AACTGGCTTA TGTGCACATC ATTGAAGGCG CCACCGCAGG CGCCCGCGAG
CTGCCCGAGC GCCCGTTCGA CTACACCGGT TTGCGCCGGG CCTACCGGGC CGCCGGTGGC
AAAGGCGCCT GGATGGTCAA CAACGGCCTG GACAAAGAGC TGGCGCAAGC CGCCATTGCC
GACGGTGCTG ACCTGGTGGC CTTTGGCCGC CTCTTCATTG CCAACCCGGA CCTGGTGGCG
CGTCTGCGCC GCGGCGGCCC GTTCAACAAA TGGGATAGCA GCACCTTCTA CGGCGGCGGC
GCCAAGGGCT ATACCGATTA CCCAACGCTC AAAGGCGCTT GA
 
Protein sequence
MPHRTATLFD PVHAGDLTLA NRIVMAPLTR NRAPDAIPTP LMAQYYTQRA SAGLIISEAT 
AISHQGQGYA DVPGLYGSEQ LEGWKHVTHG VHGAGGKIVV QLWHVGRVSH TSLQPEGGQP
VAPSAIAAKT KTVLLQDGVP VFVDTSEPRA LQAYELPDIV HTYQAAARNA VQTAGFDGVE
IHAANGYLLD QFLKAGSNLR RDDYGGSIEN RARLLLEVMQ AVTTAVGAGR VGIRLSPVTP
ANDAFDPDPQ PLFDYVVREL ATFKLAYVHI IEGATAGARE LPERPFDYTG LRRAYRAAGG
KGAWMVNNGL DKELAQAAIA DGADLVAFGR LFIANPDLVA RLRRGGPFNK WDSSTFYGGG
AKGYTDYPTL KGA