Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0397 |
Symbol | |
ID | 3961611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 404048 |
End bp | 404689 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637915230 |
Product | AMMECR1 |
Protein accession | YP_521682 |
Protein GI | 89899211 |
COG category | [S] Function unknown |
COG ID | [COG2078] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00296] uncharacterized protein, PH0010 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAT CTCACACTAA GCCGCACACG GCGGCGCATC CTGATTCGCA TGGCGCAGCG GCCAAGGGCC ACACCTTGCT GCCGATTGCC CGCGCCACCA TTTCAACGGC TTTGGGGCGC CCCCTTGAAG CACCGGAACA AGCGCTCTGG CTGCAAGAGT CGGGCGCCTG TTTTGTCACC TTGACCCAGC GCGGCCAACT GCGCGGCTGC ATTGGCACGC TGGAGGCGCG CCGCGCCCTG CTGGCTGACG TGAAGGCCAA TGCGCTGGCA GCCGCCTTCG CCGACCCGCG TTTTTCGCCG CTGGTCGCAG CAGAACTTGA ACACACCGAG ATTGAAGTCT CTTTGCTGTC GGCCATGCAG GCGATGCAGT TTGAAAACGA AGCCCACGCG CTGGCCCAGT TGCAGCCCGG CATTGACGGT GTGGTGTTTG AATTTGCCCA CTACCGCAGC ACGTTTTTGC CACAGGTGTG GGAGCAACTG CCCAGCGTGC CCGAGTTCAT GGCCCATCTG AAACACAAGG CCGGCCTGCC GCCCGGCTTC TGGGCCCCTG GTGTGCGCTT GCAGCGCTAC AGCGTGAGCA AATGGAAGGA AACCGACCTT CGGCCCGCCA CCGCCAAGGC CCCGAACCAG GAGAACTTGT AA
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Protein sequence | MSKSHTKPHT AAHPDSHGAA AKGHTLLPIA RATISTALGR PLEAPEQALW LQESGACFVT LTQRGQLRGC IGTLEARRAL LADVKANALA AAFADPRFSP LVAAELEHTE IEVSLLSAMQ AMQFENEAHA LAQLQPGIDG VVFEFAHYRS TFLPQVWEQL PSVPEFMAHL KHKAGLPPGF WAPGVRLQRY SVSKWKETDL RPATAKAPNQ ENL
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