Gene Rfer_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0397 
Symbol 
ID3961611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp404048 
End bp404689 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content63% 
IMG OID637915230 
ProductAMMECR1 
Protein accessionYP_521682 
Protein GI89899211 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAAT CTCACACTAA GCCGCACACG GCGGCGCATC CTGATTCGCA TGGCGCAGCG 
GCCAAGGGCC ACACCTTGCT GCCGATTGCC CGCGCCACCA TTTCAACGGC TTTGGGGCGC
CCCCTTGAAG CACCGGAACA AGCGCTCTGG CTGCAAGAGT CGGGCGCCTG TTTTGTCACC
TTGACCCAGC GCGGCCAACT GCGCGGCTGC ATTGGCACGC TGGAGGCGCG CCGCGCCCTG
CTGGCTGACG TGAAGGCCAA TGCGCTGGCA GCCGCCTTCG CCGACCCGCG TTTTTCGCCG
CTGGTCGCAG CAGAACTTGA ACACACCGAG ATTGAAGTCT CTTTGCTGTC GGCCATGCAG
GCGATGCAGT TTGAAAACGA AGCCCACGCG CTGGCCCAGT TGCAGCCCGG CATTGACGGT
GTGGTGTTTG AATTTGCCCA CTACCGCAGC ACGTTTTTGC CACAGGTGTG GGAGCAACTG
CCCAGCGTGC CCGAGTTCAT GGCCCATCTG AAACACAAGG CCGGCCTGCC GCCCGGCTTC
TGGGCCCCTG GTGTGCGCTT GCAGCGCTAC AGCGTGAGCA AATGGAAGGA AACCGACCTT
CGGCCCGCCA CCGCCAAGGC CCCGAACCAG GAGAACTTGT AA
 
Protein sequence
MSKSHTKPHT AAHPDSHGAA AKGHTLLPIA RATISTALGR PLEAPEQALW LQESGACFVT 
LTQRGQLRGC IGTLEARRAL LADVKANALA AAFADPRFSP LVAAELEHTE IEVSLLSAMQ
AMQFENEAHA LAQLQPGIDG VVFEFAHYRS TFLPQVWEQL PSVPEFMAHL KHKAGLPPGF
WAPGVRLQRY SVSKWKETDL RPATAKAPNQ ENL