Gene Rfer_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0395 
Symbol 
ID3961609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp402305 
End bp402952 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content63% 
IMG OID637915228 
Productdienelactone hydrolase 
Protein accessionYP_521680 
Protein GI89899209 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAA CACACGCACA ACTGGTCCAT ATTCCGGTGG ATGATGTCCA CATCGAAGGC 
ATGCTGGAAT TGCCCCCCGG GCCCCTGGGC ATTGTGCTGT TTGCCCACGG CAGCGGCAGC
AGCCGTCACA GCCCGCGCAA CAACTACGTG GCGCGCGTGC TGCACGAAAA AGGCATTGGC
ACGCTGCTGA TGGACTTGCT CACCGTCGCT GAAGACCTGG ACTACCAGAC CCGTTTCGAC
ATTGCCTTGC TGACGCACCG TCTGCTGGTT GCAACGCGCT GGGTCAGACT GGAAGCGGCC
ACGCGACAGC TGCCGATTGG CTATTTTGGC GCCAGCACCG GGGCGGCGGC GGCGCTGCAG
GCCGCCGCCG CTTTGGGCGA CAACATCCAG GCGGTCGTGT CGCGTGGAGG GCGTCCGGAC
CTGGCGGGAA ATCAGAGCCT GGAGCAGGTC AAATCCCCCA CCTTGCTGCT GGTGGGTGGC
CGCGATGAAG ACGTGATTGA ACTCAACCGC GAGGCCTACG CCCGCCTGCC CTGCACCAAG
GAATTGAGCA TCGTCCCTGG CGCAACCCAT CTGTTCGAGG AAGCGGGCAC GCTGGAAGAA
GTGGCGCGCC AGGCCGCCGT GTGGTTCAAC CAGTACCTGA AGAACTGA
 
Protein sequence
MKPTHAQLVH IPVDDVHIEG MLELPPGPLG IVLFAHGSGS SRHSPRNNYV ARVLHEKGIG 
TLLMDLLTVA EDLDYQTRFD IALLTHRLLV ATRWVRLEAA TRQLPIGYFG ASTGAAAALQ
AAAALGDNIQ AVVSRGGRPD LAGNQSLEQV KSPTLLLVGG RDEDVIELNR EAYARLPCTK
ELSIVPGATH LFEEAGTLEE VARQAAVWFN QYLKN