| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0387 |
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| Symbol | |
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| ID | 3961601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 394955 |
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| End bp | 395959 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915220 |
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| Product | pyruvate dehydrogenase (lipoamide) |
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| Protein accession | YP_521672 |
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| Protein GI | 89899201 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGC CGGCCCCGCC CAGTGGCCCG GTGCCATGGG ACAAGCCGTT TGCCTTGTCC
TTGCTGTCTG ACATGCTGCG CATCCGCCGC ATGGAAGAGC GTGCGGCCGA ACTGTACGGC
CAGCAAAAGA TACGCGGCTT TTTACATCTG TACATCGGGG AAGAAGCAGT GGCCGCCGGC
GCCCTGCGTG CTTTGAGCGC TGATGACAAG GTGGTGGCCA CATACCGCGA ACACGGCCAC
GCGCTCTTAC ACGGCCTCAA GATGGACACC ATCATGGCCG AGATGTTTGG CAGACAGGAC
GGTTGCTCTC GCGGGCGCGG TGGCTCCATG CACCTGTTTG ACCGGGCCCA TCACTTCTTT
GGCGGCCAGG CCATTGTCGG CGGTGGCCTG CCTCTGGCAA CCGGTTTGGC GCTGGCGGAC
AAATTGTTAA AACGCCGGGC ACTGACGGCC TGCTTCTTTG GTGAAGGTGC GGTGGCCGAG
GGTGCGTTTC ACGAGGCCAT GAACCTGGCC GCCCTGTGGC GGCTACCGGT GCTGTTTTGC
TGCGAAAACA ACCTTTATGC CATGGGCACG GCGCTGGCGC GCTCCGAGTC CCAGACCGAT
CTGTGCTTGA AGGCCGCGTC CTATGGCATG GAGGTCATGA CGGTCGATGG CATGGATGTG
GTGGCCGTGC ATGAGGCGGT GCGCTTTGCC GCGCAGAAGG TGCGTGAGGC CAGCGCACCC
ATGTTTGTGG AGTTGCGCAC TTACCGCTTT CGCGCGCACT CCATGTTCGA CCCCGACTTG
TACCGCGCCA AGCAGGAGAT TGAGGCCTGG AAGACGCGCG GGCCGGTCCA CACCTTTACC
GCCCGCCTCA AATTGCAGGG GATTCTCTCG GAAGACGAAT TTCTGGCGCT CGACGCTAGC
GCGCAGGCCG AGGTGGAGGC GGCCGTGGCT TTTGCTGAAG GCTCCAACTG GGAGCCGGTG
GAAGATTTGT TGCGCGACGT GCATACGCCT GCGGGAGCCG CGTGA
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| Protein sequence | MKVPAPPSGP VPWDKPFALS LLSDMLRIRR MEERAAELYG QQKIRGFLHL YIGEEAVAAG
ALRALSADDK VVATYREHGH ALLHGLKMDT IMAEMFGRQD GCSRGRGGSM HLFDRAHHFF
GGQAIVGGGL PLATGLALAD KLLKRRALTA CFFGEGAVAE GAFHEAMNLA ALWRLPVLFC
CENNLYAMGT ALARSESQTD LCLKAASYGM EVMTVDGMDV VAVHEAVRFA AQKVREASAP
MFVELRTYRF RAHSMFDPDL YRAKQEIEAW KTRGPVHTFT ARLKLQGILS EDEFLALDAS
AQAEVEAAVA FAEGSNWEPV EDLLRDVHTP AGAA
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