| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0379 |
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| Symbol | |
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| ID | 3964281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 386337 |
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| End bp | 389411 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637915212 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_521664 |
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| Protein GI | 89899193 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTT CCGAACTTTT TATCCGCCGC CCGGTGATGA CGGTGCTGCT CAATCTGGCC
ATCGTGTTGG CCGGGGTGAT CGGTTTCCGG AGCATCCCGG TGGCGGCATT GCCCAGCTAC
GACACGCCGG TGATCAATGT ATTTGCGGCT TTGCCTGGGG CCAATCCCGA AACCATGGCC
AGCTCGGTGG CGTTGCCGCT GGAAAAGCAG TTTCAGACCG TGCCGGGGCT CAAAACCATC
AGTTCGACCA GCACGCTGGG GCGCACCTCG CTGACGCTGG AGTTTGACGA GGGCCGCAAT
GTGGATGCGG CAGCGGTTGA TGTGCAGGCC GCGCTCTTAC GTGCGCAGCG TTCGCTGCCG
CAGGACATGA CGGCAACGCC GTCCTACCGC AAGGTCAATC CGGCCGATGC GCCGGTGCTG
TTGATTTCCA TGACCTCGCC CTCGCTGGCC CCGTCCGACC TGCAGGATTT TGCCGAGCAT
TTGATCTCAC CCACCTTGTC CACCATCGAT GGTGTCGCGC AGGTCAACGT CTTTGGCTCC
AAACGCTACG CCGTGCGCGT GAGCGTGCAC CCCGAGGCGC TGGCAGTGCG CAACATCGGG
CTCGATGAAT TGAGTACCGC CTTGCGCGCC GCCAATGTGA ATACCCCCGT TGGCACACTC
GACGGCCCGC GCCAGACATT GATGCTGCAG GCCAATCGGC AACTCCAGAA TGCGGCTGAT
TTTGCCGATC TGATTGTCAG TAACCGGGGC GGCAATCCGG TGCGACTCAA AGAGGTGGCG
CAAGTGGAAG ACTCTCTGGA AACGCTCAAG AGCTGGGCCA CCTTCAACGG AGAAAACTCG
ATCACGCTGG CGGTACAGCG CCAACCCGGC GCCAACACGG TGCGCGTGGT GGACGCCATT
CGGCAGGCCT TGCCAAATTT GCAGAGCCAG ATGCCGCAAT CGGTCAAATT GGTGCCCTTT
TTGGATCGCT CGGTTTCTGT GCGCGAGGCC TTGCATGACG TGTCCCTCAC GCTGCTGGGC
ACGATTGCGC TGGTGGTGCT GGTGATTTTT CTCTTTTTGC GCCGCTTTGT GGCGACCATG
ATCCCGATGC TGTCGCTGCC GGTGTCGTTG GTGGGCGCGG TGGCGCTGCT GTGGGGCTTT
TCTTATAGCC TCGACAACAT CTCGTTGCTG GGCCTGACGC TGGCGGTGGG TCTGGTGGTG
GACGATGCGA TTGTGGTGCT GGAAAACATC ATGCGTCACG TCGAGAACGG CGAGGCGCCC
TTTCCAGCCG CGCTGAAGGG CGCGCGTGAA GTCGGGTTCA CGATTATTTC AATCTCCACC
TCCCTGATCG CGGTGTTTAT TCCTATCTTC TTCATGCCCG GCGTGATCGG CCTTTTGTTT
CATGAATTTG CCGTGGTGGT CGGATTGGCG ATCATCGTCT CGGCCTTTGT GTCGCTCACC
CTGGTACCGA TGCTGGCCAG CCGTTTTTTG ACCGGCGAGG CGCACAAGAA GCCACCCGGT
GCCGTGGTGC GCTCGTTTGC GCGTGGCTTT GATCGTCTGC TGGCCGGCTA CACCCGCCTG
CTTGACATCG CGCTGGGCCA CCGAACCCTC GTGCTGCTGC TGGCACTGGC GACACTGGTG
GGCACAGTGT GGCTCGCCAA CATCATTCCC AAGGGCTTCT TTCCGGAAGA AGACATCGGG
CAAATTCAGG TTTCCACCGA GGCGTCTGAA GACACCTCGT TCCCCGAGAT GGTGCGTTTG
CAGGAGCAAG CCGCAGCCAT CATCCGCTTG GACCCCAACG TGGCCGCTGT GAGCTCCTTC
AATGGCGGCT CTGGTGCGCA GAACACGGGG CGCATGTTTA TCGCATTGAA ACCAAGCAAC
CAACGCCAGA CCATGAAAAA AGTGGTTGAA GGCTTGCGCC GCAAGCTGCG CGAGCTGGCC
GGCATCAGCG TCTTCATGCG TCCGGTTCAG AACCTGCAAC TCGGGGGGCG CCCCAGCAAG
GCGCAGTACC AATACGTTTT GCAGAGCGTC CGGGCCGATG AACTCAATAG CTGGGCCAGC
AAGCTGCAAG ACAGTCTGAG CGCTGACCCC TTATTTCGCG ATGTGACGAG CGACGCGCAG
TTGCGTGGCT TGCAGGCGCA GCTCAAGATT GACCGCGACA GCGCCAACAA GCTCGGCGTT
TCAATCGATG GCATCCGCAC CGCGCTGTAC AGCGCATTTG GGGAGCGCCA GGTCTCCACC
ATTTACCTGC CCACCGACAG CTACCAGGTG ATCATGGAGG TGCAAGCCGA CGCCAAGGAA
GACGAGCGTG CGCTGGGCGG CATTTACGTG CGCTCGAACA CCGGCGCCTT GGTGCCGATC
TCCAACTTCA CCACGGTCGA GCGCACCTTG GGGCCGACCG CCATCAACCA TGTGGGTCAG
TTGCAGGCCG TCACGGTGTC TTTCAATCTG GCGCCCGGTG CGGCGCTGGG GGCTGCCACG
GCAAAAATTG ATGCTGCCCG CGCGGCGATC CAGATGCCCT CGTCCATCAT CACCAGCTAC
GGTGGCGACG CCGCGGTTTT CAAGAGCTCA CAAGGCAGCC AGTTGGTGTT GATCATTGCC
GCCTTGCTGG TCATCTACGT GTTGCTGGGG GTGCTCTATG AGAGTTATAT CCATCCGATC
ACGATCATTG CCGGTTTGCC CTCGGCGGCC GTCGGGGCCT TGGTCACCTT GATGCTGTTT
GGACAAGACC TGACCTTGAT TGCCACCATA GGGATCGTGA TGCTGGTGGG GATTGTGAAG
AAAAACGCCA TCATGATGAT CGACTTTGCC CTTGACGCGC AGCGCCATCA GGGTATGGCG
GCGGCGCAGG CGATTCGGGA GGCCTGCATC CTGCGTTTTC GCCCCATCAT GATGACCACC
ATGGCGGCCC TGATGGGCGC GCTGCCGATT GCCCTGGGCC TTGGCGCCGG GGCCGAGTTG
CGTCAGCCGC TGGGCCTGGC GGTCGTGGGC GGGCTGGTGT TCTCACAAGC CATCACGCTC
TTTATCACGC CGGTGATCTA CCTCGCGCTG GATCGTTTTA GCGGCACGGG ACCCGTGCTC
ACAGCAGAAT CCTGA
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| Protein sequence | MNFSELFIRR PVMTVLLNLA IVLAGVIGFR SIPVAALPSY DTPVINVFAA LPGANPETMA
SSVALPLEKQ FQTVPGLKTI SSTSTLGRTS LTLEFDEGRN VDAAAVDVQA ALLRAQRSLP
QDMTATPSYR KVNPADAPVL LISMTSPSLA PSDLQDFAEH LISPTLSTID GVAQVNVFGS
KRYAVRVSVH PEALAVRNIG LDELSTALRA ANVNTPVGTL DGPRQTLMLQ ANRQLQNAAD
FADLIVSNRG GNPVRLKEVA QVEDSLETLK SWATFNGENS ITLAVQRQPG ANTVRVVDAI
RQALPNLQSQ MPQSVKLVPF LDRSVSVREA LHDVSLTLLG TIALVVLVIF LFLRRFVATM
IPMLSLPVSL VGAVALLWGF SYSLDNISLL GLTLAVGLVV DDAIVVLENI MRHVENGEAP
FPAALKGARE VGFTIISIST SLIAVFIPIF FMPGVIGLLF HEFAVVVGLA IIVSAFVSLT
LVPMLASRFL TGEAHKKPPG AVVRSFARGF DRLLAGYTRL LDIALGHRTL VLLLALATLV
GTVWLANIIP KGFFPEEDIG QIQVSTEASE DTSFPEMVRL QEQAAAIIRL DPNVAAVSSF
NGGSGAQNTG RMFIALKPSN QRQTMKKVVE GLRRKLRELA GISVFMRPVQ NLQLGGRPSK
AQYQYVLQSV RADELNSWAS KLQDSLSADP LFRDVTSDAQ LRGLQAQLKI DRDSANKLGV
SIDGIRTALY SAFGERQVST IYLPTDSYQV IMEVQADAKE DERALGGIYV RSNTGALVPI
SNFTTVERTL GPTAINHVGQ LQAVTVSFNL APGAALGAAT AKIDAARAAI QMPSSIITSY
GGDAAVFKSS QGSQLVLIIA ALLVIYVLLG VLYESYIHPI TIIAGLPSAA VGALVTLMLF
GQDLTLIATI GIVMLVGIVK KNAIMMIDFA LDAQRHQGMA AAQAIREACI LRFRPIMMTT
MAALMGALPI ALGLGAGAEL RQPLGLAVVG GLVFSQAITL FITPVIYLAL DRFSGTGPVL
TAES
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