| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0365 |
|---|
| Symbol | |
|---|
| ID | 3962492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 366160 |
|---|
| End bp | 367530 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637915197 |
|---|
| Product | MltA |
|---|
| Protein accession | YP_521650 |
|---|
| Protein GI | 89899179 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2821] Membrane-bound lytic murein transglycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGCC GCGCTGACGA TCATGGGCTT ATGGTGTCCT TTGTGTCCAG GCGGCGTCAG
GTCTTTTCAA CCGACGATGT TGACTTTGGC GCGGCGGCGT CATCGGGGGT GGTCGGCGCC
GCTGGCAATT CACCCCGGCG GCGCCCGGAA AACATGGTCC ACCAGACAAT CAGCAGCAGC
AGCAGCAAGG CTCCCAGCGC CTCCAGTAAG AGCAAACTCA TGAATCGACT CCGAAGTACG
GTCTTAAATA CCTGGATTGT AGGGATGCTC GTCGCATGCA GCAGCGTGCC GATACCGCCT
CAGCAACCCG CTGCGCCCAC GGAAATGGCC GCGCCGCCCG TCGGCGCCCG GCCTGACGAT
GCCGGGCCCC TGCCCGAGCC CATCGTGCGC GCCAAAAGCC GCTGGACAGC GGTGCGTTGG
GCAGAATTGC CTGGGTTCGA GGACGACACC TTGTTTGAAG CCTGGAACGC CTGGATCAAA
AGCTGCGAGC GACCGGGCCC GGTGTTTGCG CCCTTGTGCA GCGAGGTGCG GCGCTTGAGC
ATCGGCGACG AGCCACAGCG CCGGGCCTGG CTGCAGGCCC GGCTGCAGCC GTACCGAATC
GACACTTTGG CGGGTGACGC AGAGGGCCTG CTGACCGCTT ATTTCGAACC GGTGCTGGAC
GCCACACGCA GCGCCAGCGC TGACTTCAGC GTGCCTTTGT ACCAGCCGCC GCCGGGTCTG
GCGCAAAACC TGCCTTGGTA CACACGCGAG CAGATTGACA CCTCGGCGCG GGCGCAGGCG
GCGCTCAAGG GGCGTGAAAT TGTGTTTCTA AGCGACCCGA TCGATGCCCT GGTGTTGCAG
ATACAAGGCT CCGGGCGGGT GCGCATCCGC CAACCCGACG GCAGTCAAAC CCTGGCGCGT
CTGGCGTACG CGGGCTCCAA CGGGCAACCG TATAAAAGCG TGGGCCGCTG GTTGCTCGAT
CAAGGGGCGG TGCGTGACGC CTCGTGGCCC GCCATCAAGG CCTGGCTGGC ACAAAACCCG
GGTCGCGTGA ATGAATTGTT GTGGAGCAAT CCACGCACCG TGTTTTTCCG CGAAGAGGCC
ATGTCGGAAC TCGATGCGGC CTGGGGGCCC AAAGGGGCTC AGGGCGTGCC GCTGACACCC
GGTCGCTCGA TTGCGGTGGA CCCGGGCAGC ATTCCCTATG GCACGCCCGT GTGGCTGGCC
TCCCATGGCC CTGGCCTCAA CCTGCAAAAG CTGGTGCTGG CGCAAGACAC TGGCAGCGCC
ATCGTGGGCG GCGTGCGCGC TGACTACTTT GCCGGCTGGG GCCCTGTTGC CGCCGAACTG
GCCGGTCGTC TCAAGCAGCC CTTGCGCCTG TGGGTGCTGT GGCCCAAGTA G
|
|---|
| Protein sequence | MSRRADDHGL MVSFVSRRRQ VFSTDDVDFG AAASSGVVGA AGNSPRRRPE NMVHQTISSS
SSKAPSASSK SKLMNRLRST VLNTWIVGML VACSSVPIPP QQPAAPTEMA APPVGARPDD
AGPLPEPIVR AKSRWTAVRW AELPGFEDDT LFEAWNAWIK SCERPGPVFA PLCSEVRRLS
IGDEPQRRAW LQARLQPYRI DTLAGDAEGL LTAYFEPVLD ATRSASADFS VPLYQPPPGL
AQNLPWYTRE QIDTSARAQA ALKGREIVFL SDPIDALVLQ IQGSGRVRIR QPDGSQTLAR
LAYAGSNGQP YKSVGRWLLD QGAVRDASWP AIKAWLAQNP GRVNELLWSN PRTVFFREEA
MSELDAAWGP KGAQGVPLTP GRSIAVDPGS IPYGTPVWLA SHGPGLNLQK LVLAQDTGSA
IVGGVRADYF AGWGPVAAEL AGRLKQPLRL WVLWPK
|
|---|
| |