| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0354 |
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| Symbol | |
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| ID | 3962481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 355250 |
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| End bp | 356167 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637915186 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_521639 |
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| Protein GI | 89899168 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0181159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGT TGAACCTCAC CCTACCCGGC AGGCGCTTTG TGATTGGTGT GCCCGCCGTC
TGGCTCGTTC TGTTTTTCAT GCTGCCGTTT TTGATTCTGC TCTACATCAG CTTTGTCGAC
ATGGGCAACG ACATCTCGCC CTTCAAGCCG ATCTGGGACT CTGAAACCGG CCTGCTCAAG
CTCAAGTACG AAAACTACTA TTCCATTTTT CAGTCGAGTG ACGGTAGCGG GCTGTTTCAG
ACCATTTACA TCGAGGCCTA CGTGCGCTCG ATCTGGTACG CGCTCTGCAC TGCGGTGCTG
TGCCTGGTGA TAGGCTACCC TTTTTCATAC TTCATCGCTC GCTCGGCCCC CAATTTGCGG
CCGGCCTTGC TGATGATGGT GATGCTGCCA TTTTGGACCT CGTTTTTGCT ACGGGTCTAT
GCTTGGAAGG GCATATTGGC GGATCAGGGC GTGTTGAATC AGATGCTCCT GGCTCTGGGG
CTCATCACCG AACCGATGCA AATGCTCTAC ACCGATGTGT CGATGCTGGT GGGCATGACC
TATGTCTATC TGCCGTTTAT GGTGCTGCCG CTGTACGCCA ATCTGGTCAA GATGGATATT
CGCTTGTTGG AGGCCGCTTA CGATCTGGGG GCCTCGCCCT TCAAGGCGTT TTGGCTTGTC
ACCGTGCCGC TGTCCAAGGC CGGCATCATT GCTGGCTTCA TGCTGGTGTT TATTCCCTGT
GTCGGCGAGT TCGTGATTCC GTCGCTGCTG GGCGGGCCGG AAAACATCAT GATTGGCCGC
GTGGTGTGGG ACGAAATGTT CACCAGCAAC AACTGGCCGC GCGCCTCTGC ACTGGCGGTG
GTGATGATTG GCTTGATTGT GGTGCCACTG GCTGTTTACT ACCACTTCAC CGGCGATGCG
GCCGAAGTGC GTCGTTGA
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| Protein sequence | MAKLNLTLPG RRFVIGVPAV WLVLFFMLPF LILLYISFVD MGNDISPFKP IWDSETGLLK
LKYENYYSIF QSSDGSGLFQ TIYIEAYVRS IWYALCTAVL CLVIGYPFSY FIARSAPNLR
PALLMMVMLP FWTSFLLRVY AWKGILADQG VLNQMLLALG LITEPMQMLY TDVSMLVGMT
YVYLPFMVLP LYANLVKMDI RLLEAAYDLG ASPFKAFWLV TVPLSKAGII AGFMLVFIPC
VGEFVIPSLL GGPENIMIGR VVWDEMFTSN NWPRASALAV VMIGLIVVPL AVYYHFTGDA
AEVRR
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