| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0353 |
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| Symbol | |
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| ID | 3962480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 354137 |
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| End bp | 355237 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637915185 |
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| Product | spermidine/putrescine ABC transporter ATP-binding subunit |
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| Protein accession | YP_521638 |
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| Protein GI | 89899167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00527297 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACG CTGGCTCCAG AGACAATTAC CTGGTGACCG AAAAACTGGT CAAACGCTTT
GACGAGGCGG TGGCGGTTGA TGAGGTGGAT TTGTCGATCA AACAGGGCGA GATTTTTGCT
CTGTTGGGCA GCTCAGGCTG TGGCAAGTCC ACCCTGCTGC GGATGCTGGC CGGGTTTGAG
ACACCCACCT CCGGGCGGAT TTTGCTCAGC GGGCAGGATG TGGCCAGGCT GGCGCCCTAT
GAGCGGCCCT TCAACATGAT GTTTCAGTCG TATGCCTTGT TTCCGCATCT TGATATTTGG
GAAAACATCG CCTTTGGCCT CAAGCGCGAG GGGCTACCCA AAAGCGACAT TCAGCAGCGT
GTCGGCGAAA TGCTCGACCT GGTGCAGCTC ACCCCGTATG CCAAACGCAA GCCGCACCAG
CTGTCGGGTG GCCAGCAGCA ACGCGTGGCG CTGGCGCGCA GTCTGGCGAA AAAGCCCAAG
GTGCTGCTGC TGGACGAGCC GCTTGGGGCG CTGGACAAGA AGTTGCGCGA GCAGACCCAG
TTTGAGCTGG TCAATATCAT CGAAAAAGTC GGCGTGACTT GCGTCATGGT GACGCATGAT
CAGGAAGAAG CCATGACCAT GGCCGGGCGT ATTGCCGTCA TGAGCAAGGG ACGGGTGCTG
CAGGTGGGTT CACCTGAAGA GGTTTATGAA CATCCCTCCA GTCGTTTCGT GGCGGATTTC
ATTGGCAACG TGAATTTGTT TGACGGCAGG TTGAGCATTG ATCAGCCAGA CCATTGTGCG
GTGGCCACCA GCATGGGTGA AATCCATGTC AGTCACGGTG TGAGTGGGGC GCTGAACATG
CCGTCTGCGA TTGCGGTGCG GCCAGAAAAA ATTGAAATCA ACAGAGAACG TCCGGCCGCA
GATCACAACG TATTTGCCGG CAAAGTCAAA GAAATCGCTT ACTTCGGCTC GTACAACACC
TTTATCGTTC AGACGGAAGA CGGCAAGCGG GTCAAGATAA CCGAGGCCAA TACCTCGCGC
CACGAGCTGA GCCACATCAC CTGGGAAGAC GATGTGTTCT TTTGGTGGAG CGACGGCGCG
GGCGTCGTGT TGCGCGACTA A
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| Protein sequence | MADAGSRDNY LVTEKLVKRF DEAVAVDEVD LSIKQGEIFA LLGSSGCGKS TLLRMLAGFE
TPTSGRILLS GQDVARLAPY ERPFNMMFQS YALFPHLDIW ENIAFGLKRE GLPKSDIQQR
VGEMLDLVQL TPYAKRKPHQ LSGGQQQRVA LARSLAKKPK VLLLDEPLGA LDKKLREQTQ
FELVNIIEKV GVTCVMVTHD QEEAMTMAGR IAVMSKGRVL QVGSPEEVYE HPSSRFVADF
IGNVNLFDGR LSIDQPDHCA VATSMGEIHV SHGVSGALNM PSAIAVRPEK IEINRERPAA
DHNVFAGKVK EIAYFGSYNT FIVQTEDGKR VKITEANTSR HELSHITWED DVFFWWSDGA
GVVLRD
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