Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0341 |
Symbol | |
ID | 3961380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 340563 |
End bp | 341504 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915173 |
Product | LysR family transcriptional regulator |
Protein accession | YP_521626 |
Protein GI | 89899155 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.398089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCTT CGTTATTCCC AATCATCGCC ATGGATCTGA AGCAACTGGA ATATTTTGTG CGCGTGGCCG AACTGGGCAG TTTCACCCGT GCCGCCATTG CGCTGGATGT GGCCCAACCT GCCTTGAGCC GCCAGGTGCG CCTGCTGGAG GTCGAGCTGC GGCAAAACCT GTTGACCCGC AATGGCCGCG GTGCGCTGCC CACCGAGGCG GGCAAGCTGC TGCTGGCGCA TGGCCGCGGC ATCCTGCACC AGGTGGAACG TGCCCGCGAA GAACTCGGCC GGGTGCGTGG CTCGTTGGCG GGGCGTGTGG CCGTGGGCTT GCCCACCAGC TTGGCCCGGG TGTTGACAGT GCCTTTGATT CGGGCCTTCC GCATCGAATT GCCGGATGCC ACACTTGCCA TCAGCGAAGG CTTGTCCGTG CCGATGCAAG AGTCGCTGAT CGCCGGGCGG CTTGACATTG CGGTGCTTTA CAACGCCCAA CCGACCGCGG AAATAGAAAT CACCCCGCTG CTGGAAGAAG ACCTGCTGCT GGTGCAACGC CGCCCACCCG GCTTGCCGGA AGACCCGCCG CCCGGCCCCA TCACGCTGCG GGAACTGGGG CAGCTGCCCC TGGTCATTCC CACCCGACCC AATGCGATCC GCATGCACGT GGAGTCTGAG TTGGCCAATA TCGGCTGTCG GCTGAACATC GCGCTGGAAA TTGACGGCGT GTCGGCCATC CTGGATCTGG TGGCGGACGG GGCCGGTTAC GCCGTGTTGT CACGCAACGC GGTGTCCAGC TCCATCCGTC CTTCGGCATT TTCAGTGCGC ACCATCACCG CCCCGGTACT ACGCACCAAA GTCAGCATGG CCACCAGTTC ATTACGCCCG ACAACACTGA CCCAGCAAAC CACCCTGAAA CTACTGCATA AAACTATTTG CAAAATTGTG GGCCCTATTT GA
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Protein sequence | MDASLFPIIA MDLKQLEYFV RVAELGSFTR AAIALDVAQP ALSRQVRLLE VELRQNLLTR NGRGALPTEA GKLLLAHGRG ILHQVERARE ELGRVRGSLA GRVAVGLPTS LARVLTVPLI RAFRIELPDA TLAISEGLSV PMQESLIAGR LDIAVLYNAQ PTAEIEITPL LEEDLLLVQR RPPGLPEDPP PGPITLRELG QLPLVIPTRP NAIRMHVESE LANIGCRLNI ALEIDGVSAI LDLVADGAGY AVLSRNAVSS SIRPSAFSVR TITAPVLRTK VSMATSSLRP TTLTQQTTLK LLHKTICKIV GPI
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