| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0315 |
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| Symbol | |
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| ID | 3961276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 315154 |
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| End bp | 315717 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637915148 |
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| Product | phenylacetic acid degradation-related protein |
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| Protein accession | YP_521601 |
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| Protein GI | 89899130 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGTTG ATCAAGTTGT GGCCAATTGG ATGGCAGAGG AAGAGGAAAC ATGTGCGCAC
CTGATCGCAC CAGATATTGC TACGAAAGAG CAGCTCGCCG GTCTCTCTGG TATGGAATTC
TTCGAGAGGA TACGGACAGG CAAACTGCCG CCCGCCCCAA TCGGGGAAAC TCTTGATTTC
GTTGCGATTC GCATTGAGCC TGGCTCCGTG GTTTTCCAAG GTCGACCGCA CCGCAGGCAT
TACAACCCCT TGGGCACGGT ACATGGCGGA TGGTTTGCCA CATTGCTCGA CACGGCGGTA
GGATGTGCAG TGCATTCGAC CTTGCAGGCA GGCAAAGGCT TCACCACGCT GGAGTTGAAG
GTCAATATGG TGCGCGCTTT GACCGATAGG GTTCCGTTAA TCCGCGCGAT AGGCAAATTG
GTTCATGCTG GCCGTCAGGT TGCCACAGCA GAGGGGCGGA TCGTCGGACC AGATGGCAAG
CTATATGCGC ATGCAACCAC CACTTGTCTG ATCTTCGATC ATCCAAAAGT CAAAATGGGA
AGTGGCACAG CGCCAAGTCG TTGA
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| Protein sequence | MNVDQVVANW MAEEEETCAH LIAPDIATKE QLAGLSGMEF FERIRTGKLP PAPIGETLDF
VAIRIEPGSV VFQGRPHRRH YNPLGTVHGG WFATLLDTAV GCAVHSTLQA GKGFTTLELK
VNMVRALTDR VPLIRAIGKL VHAGRQVATA EGRIVGPDGK LYAHATTTCL IFDHPKVKMG
SGTAPSR
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