Gene Rfer_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0306 
Symbol 
ID3960329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp306423 
End bp307499 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content59% 
IMG OID637915139 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_521592 
Protein GI89899121 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.126794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTTA CACCGCTTAA GGCATCGTCC TTGCAATTGA GCAATCGTGT TGTCATGTCG 
CCGCTCACCC GCAGCCGTGC TTCACAAGAC AACATACCCA CTGCGCTGAT GGCCGAGTAC
TACGGTCAAC GCGCGACGGC GGGCTTGATC ATCACTGAGG GCACCTCGCC ATCGCCCAAC
GGGCTGGGCT ATCCCCGCAT GCCCGGCCTT TTCAATGCCG TTCAAGTCGC AGGCTGGAAG
CAGGTGACCG ATGCCGTGCA TGCCAAAGGC GGGAAGATCG TCATTCAACT GATGCACACA
GGCCGGGTAA CGCACGTTGC CAATCTTCCG GCAGGGGCCG AGGTGGTGGG ACCTTCAGCA
GACCCGTGCC CTGGAGAGAT GATCACAGAC GCTCAAGGCA TGCAGCCGCA TTCAACGCCC
TGGGCGATGA CGCAGGCGGA CATCACGACC GCCGTTGATG AATATGTGCA ATCCGCCAAG
CTGGCCATCG AAGCAGGCTT TGATGGCGTT GAGTTGCACG CTGCAAATGG CTACCTGATC
GAGCAGTTCC TGAATGCGAA CGTCAACAAG CGAACGGACG GCTATGGCAG CAGCATCGAA
GGCCGGAACC GCTTTGCACT GGAAGTTGCA CGCGCGACCG CTGCCGCTAT TGGTGCGGAC
AAGGTGGGTA TCCGCCTGTC CCCGCACGGT GTTTTGGGAG GCACAGGCAC ATTCCCTGAA
GTGGATGCGC AATACCTTGC ACTGACGGAT GCCTTGTCTT CACTGGAGTT GGCCTATATC
CACGTGCTAG ACCATTCTGC CTTGGGCACA CCACCCGTAC CAGAAGCAAC TAAAAAAGCC
TTGCGTGCCG CGTTCAAAGG CACCTTCATT CTTGCCGGTG GATTTGACCG CGCCAGTGCC
GAGGCTGCGC TTGCAGAAGG GCGTGCCGAT CTGATTGCAT TTGGCAGACC ATTTATCGCC
AATCCCGATT GGGTTGCCCG CATGCGAAAC GGCGCGGCAG TCAGCGCTCT GGACATGTCA
ACGTTCTACA CGCCCGGCCC AAAGGGCTAC ACCGACTATC CAAGCCTCGG AGCCTGA
 
Protein sequence
MLFTPLKASS LQLSNRVVMS PLTRSRASQD NIPTALMAEY YGQRATAGLI ITEGTSPSPN 
GLGYPRMPGL FNAVQVAGWK QVTDAVHAKG GKIVIQLMHT GRVTHVANLP AGAEVVGPSA
DPCPGEMITD AQGMQPHSTP WAMTQADITT AVDEYVQSAK LAIEAGFDGV ELHAANGYLI
EQFLNANVNK RTDGYGSSIE GRNRFALEVA RATAAAIGAD KVGIRLSPHG VLGGTGTFPE
VDAQYLALTD ALSSLELAYI HVLDHSALGT PPVPEATKKA LRAAFKGTFI LAGGFDRASA
EAALAEGRAD LIAFGRPFIA NPDWVARMRN GAAVSALDMS TFYTPGPKGY TDYPSLGA