| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0305 |
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| Symbol | |
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| ID | 3960328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 305681 |
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| End bp | 306385 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915138 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_521591 |
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| Protein GI | 89899120 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.123589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCG AAAATGCTGT CGTCCTCGTC ACCGGTGCCA ACCGTGGAAT CGGTTTGGCC
TTTGCGCGTG AATTGCTCGC CCGTGGCGCC CGCAAAGTCT ACGCCACAGC CCGAGATCCT
GCAACGGTGA CCTTGGCCGG TGTGCAGGCT TTGCAGCTGG ATGTGACCAA TGCCTGGCAG
GTTGCCGCCG CTGCACACCA GGCGGCGGAC GTAACGCTGG TGATCAACAA CGCCGGCATT
GCCCAACCCG GAGGGTTTCT CGCGCAGGAC AGCGAAGCGG TTGCGCGTCG CATCTTCGAG
ACCAACTTCT TTGGCATGCT GAACATGAGC AAGGCCTTCG CGCCGGTGCT CAAGGCCAAT
GGCGGCGGCG CGCTGCTCAA TGTGTTGTCG GTCGCGTCGT GGGTGAACGG TGGCGAGTTG
GCAGCCTATT CGGCCAGCAA GTCAGCCGCG TGGTCGCTGA CCAACGCTCT GCGCCACGAG
CTGGCGGGTC AGAAGACCCA GGTACTGGGA TTGCACATGG CCTATGTGGA CACTGACCTC
ACACGCGGCT TCGAAGTACC GAAGAGCAGC GCTGAAGAAA TCGTCCAACG CGCACTCGAC
GGGCTGGAGA CAGGCGCAGA AGAAGTGCTG GCCGATGCAC TGACACAACA GGTCCGGCAA
GGGCTAACGG CGCCGCGCCC GGGCTACCTG CCCCAGGCGA ACTGA
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| Protein sequence | MKIENAVVLV TGANRGIGLA FARELLARGA RKVYATARDP ATVTLAGVQA LQLDVTNAWQ
VAAAAHQAAD VTLVINNAGI AQPGGFLAQD SEAVARRIFE TNFFGMLNMS KAFAPVLKAN
GGGALLNVLS VASWVNGGEL AAYSASKSAA WSLTNALRHE LAGQKTQVLG LHMAYVDTDL
TRGFEVPKSS AEEIVQRALD GLETGAEEVL ADALTQQVRQ GLTAPRPGYL PQAN
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