Gene Rfer_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0300 
Symbol 
ID3960323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp300889 
End bp302124 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content70% 
IMG OID637915133 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_521586 
Protein GI89899115 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCCC ACATCGTCAT CATCGGCGCC GGCCAGGCCG GTGTGCAAAC CGCCGAGGCC 
CTGCGCGCCG GCGGCTTTGC CGGCGCCATC ACCCTGCTGG GCGACGAGCC CCACGGCCCC
TACCACCGCC CGCCGCTGTC CAAAGCCTGG CTGGCCGGTG ACATCGGCGC TGAGCAACTG
GTGATGCGTG CGCCCGAAGC GCTGGCGCGC AAAAACATCG CGCTGCGCAC CCACACCCAG
GTCAACGCCA TCGACCGTGC GGCCCGGCAA GTCAAGCTGG CCGACGGCAG TGCCCTGTCC
TACAGCGGCC TGGTGCTGGC CACCGGCTCC ACTCCGCGCC GCCTGCCACT GCCAGGTGGC
GATGCCAAGG GTGTGCTGGC CCTGCGTTCA CGCATGGATG CCAGCGCCAT CGCCGAACGC
ATGGCGATGT GCATCGAACA GCAGTTGCCG GTGGTGGTGA TTGGCGGCGG TTTCATCGGC
CTGGAAGTGG CGGCCACCGC GCGCAAGAAG GGCTTGCGCG TCACCGTGCT GGAAGCTGCG
CCCCGACTGC TGGGGCGCGT GCTGGCCCCG CTGCTGTCCG ACTGGTACGC CCAGTTGCAC
CGCAGCCATG GCGTCAACCT GGTGTTGGGA GCGCAGATCA CGGCGCTGGA AGCCGACCGC
CAAGGCACTG TGAGCGGCGT GCGCATGGCC GATGGCACGC TGCACCCCGC CGCCCTGGTG
GTGGTGGGCA TTGGCGTGAG CGCCAACGAG CAGCTCGCCC GCGACGCCGG CCTGGCATGC
GAGCGCGGCA TCGTGGTCGA TGCCTGCGGC CGCACCAGTG ATCCGGTCAT CGTGGCGGCA
GGCGACTGCG CCGCGCGCCG CCTGCCGGAC GGCAGCCTGC TGCGCTTGGA GTCGGTGCAA
AACGCCATCG AGCAGGGCAA GTCGGTCGCC GCCGCGCTGC TGGGACAAGA GCGCCCCTTC
ACTGCCACGC CCTGGTTCTG GAGCGACCAG TACGACAAGA AGCTGCAGAT GGCGGGCCTC
TCCGGCGGCG CTGACCAGTG GGCTGTGCGC GGCGACATGG ACAGCGGCAG TTTCTCTGTG
TATCACCTGC GCGCCGGGCA ATTGCTGGCG GTGGACAGCG TCAACGCCAG CCGCGACCAC
CTGCAGGCGC GCAAGCTGCT CGACGCCGGC GTGTCACCCA CGCCAGCCCA AGTCGGAGAT
GCCGCGTTTG ACCTTGGCAC CCTGCTGCTG AAGTGA
 
Protein sequence
MTAHIVIIGA GQAGVQTAEA LRAGGFAGAI TLLGDEPHGP YHRPPLSKAW LAGDIGAEQL 
VMRAPEALAR KNIALRTHTQ VNAIDRAARQ VKLADGSALS YSGLVLATGS TPRRLPLPGG
DAKGVLALRS RMDASAIAER MAMCIEQQLP VVVIGGGFIG LEVAATARKK GLRVTVLEAA
PRLLGRVLAP LLSDWYAQLH RSHGVNLVLG AQITALEADR QGTVSGVRMA DGTLHPAALV
VVGIGVSANE QLARDAGLAC ERGIVVDACG RTSDPVIVAA GDCAARRLPD GSLLRLESVQ
NAIEQGKSVA AALLGQERPF TATPWFWSDQ YDKKLQMAGL SGGADQWAVR GDMDSGSFSV
YHLRAGQLLA VDSVNASRDH LQARKLLDAG VSPTPAQVGD AAFDLGTLLL K